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16S rRNA sequencing of samples from universal stool bank donors
OBJECTIVES: Universal stool banks provide stool to physicians for use in treating recurrent Clostridioides difficile infection via fecal microbiota transplantation. Stool donors providing the material are rigorously screened for diseases and disorders with a potential microbiome etiology, and they a...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7988957/ https://www.ncbi.nlm.nih.gov/pubmed/33757553 http://dx.doi.org/10.1186/s13104-021-05520-z |
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author | Santiago, Marina Olesen, Scott W. |
author_facet | Santiago, Marina Olesen, Scott W. |
author_sort | Santiago, Marina |
collection | PubMed |
description | OBJECTIVES: Universal stool banks provide stool to physicians for use in treating recurrent Clostridioides difficile infection via fecal microbiota transplantation. Stool donors providing the material are rigorously screened for diseases and disorders with a potential microbiome etiology, and they are likely healthier than the controls in most microbiome datasets. 16S rRNA sequencing was performed on samples from a selection of stool donors at a large stool bank, OpenBiome, to characterize their gut microbial community and to compare samples across different timepoints and sequencing runs. DATA DESCRIPTION: 16S rRNA sequencing was performed on 200 samples derived from 170 unique stool donations from 86 unique donors. Samples were sequenced on 11 different sequencing runs. We are making this data available because rigorously screened, likely very healthy stool donors may be useful for characterizing and understanding microbial community differences across different populations and will help shed light into the how the microbiome community promotes health and disease. |
format | Online Article Text |
id | pubmed-7988957 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-79889572021-03-25 16S rRNA sequencing of samples from universal stool bank donors Santiago, Marina Olesen, Scott W. BMC Res Notes Data Note OBJECTIVES: Universal stool banks provide stool to physicians for use in treating recurrent Clostridioides difficile infection via fecal microbiota transplantation. Stool donors providing the material are rigorously screened for diseases and disorders with a potential microbiome etiology, and they are likely healthier than the controls in most microbiome datasets. 16S rRNA sequencing was performed on samples from a selection of stool donors at a large stool bank, OpenBiome, to characterize their gut microbial community and to compare samples across different timepoints and sequencing runs. DATA DESCRIPTION: 16S rRNA sequencing was performed on 200 samples derived from 170 unique stool donations from 86 unique donors. Samples were sequenced on 11 different sequencing runs. We are making this data available because rigorously screened, likely very healthy stool donors may be useful for characterizing and understanding microbial community differences across different populations and will help shed light into the how the microbiome community promotes health and disease. BioMed Central 2021-03-23 /pmc/articles/PMC7988957/ /pubmed/33757553 http://dx.doi.org/10.1186/s13104-021-05520-z Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Data Note Santiago, Marina Olesen, Scott W. 16S rRNA sequencing of samples from universal stool bank donors |
title | 16S rRNA sequencing of samples from universal stool bank donors |
title_full | 16S rRNA sequencing of samples from universal stool bank donors |
title_fullStr | 16S rRNA sequencing of samples from universal stool bank donors |
title_full_unstemmed | 16S rRNA sequencing of samples from universal stool bank donors |
title_short | 16S rRNA sequencing of samples from universal stool bank donors |
title_sort | 16s rrna sequencing of samples from universal stool bank donors |
topic | Data Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7988957/ https://www.ncbi.nlm.nih.gov/pubmed/33757553 http://dx.doi.org/10.1186/s13104-021-05520-z |
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