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16S rRNA sequencing of samples from universal stool bank donors

OBJECTIVES: Universal stool banks provide stool to physicians for use in treating recurrent Clostridioides difficile infection via fecal microbiota transplantation. Stool donors providing the material are rigorously screened for diseases and disorders with a potential microbiome etiology, and they a...

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Detalles Bibliográficos
Autores principales: Santiago, Marina, Olesen, Scott W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7988957/
https://www.ncbi.nlm.nih.gov/pubmed/33757553
http://dx.doi.org/10.1186/s13104-021-05520-z
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author Santiago, Marina
Olesen, Scott W.
author_facet Santiago, Marina
Olesen, Scott W.
author_sort Santiago, Marina
collection PubMed
description OBJECTIVES: Universal stool banks provide stool to physicians for use in treating recurrent Clostridioides difficile infection via fecal microbiota transplantation. Stool donors providing the material are rigorously screened for diseases and disorders with a potential microbiome etiology, and they are likely healthier than the controls in most microbiome datasets. 16S rRNA sequencing was performed on samples from a selection of stool donors at a large stool bank, OpenBiome, to characterize their gut microbial community and to compare samples across different timepoints and sequencing runs. DATA DESCRIPTION: 16S rRNA sequencing was performed on 200 samples derived from 170 unique stool donations from 86 unique donors. Samples were sequenced on 11 different sequencing runs. We are making this data available because rigorously screened, likely very healthy stool donors may be useful for characterizing and understanding microbial community differences across different populations and will help shed light into the how the microbiome community promotes health and disease.
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spelling pubmed-79889572021-03-25 16S rRNA sequencing of samples from universal stool bank donors Santiago, Marina Olesen, Scott W. BMC Res Notes Data Note OBJECTIVES: Universal stool banks provide stool to physicians for use in treating recurrent Clostridioides difficile infection via fecal microbiota transplantation. Stool donors providing the material are rigorously screened for diseases and disorders with a potential microbiome etiology, and they are likely healthier than the controls in most microbiome datasets. 16S rRNA sequencing was performed on samples from a selection of stool donors at a large stool bank, OpenBiome, to characterize their gut microbial community and to compare samples across different timepoints and sequencing runs. DATA DESCRIPTION: 16S rRNA sequencing was performed on 200 samples derived from 170 unique stool donations from 86 unique donors. Samples were sequenced on 11 different sequencing runs. We are making this data available because rigorously screened, likely very healthy stool donors may be useful for characterizing and understanding microbial community differences across different populations and will help shed light into the how the microbiome community promotes health and disease. BioMed Central 2021-03-23 /pmc/articles/PMC7988957/ /pubmed/33757553 http://dx.doi.org/10.1186/s13104-021-05520-z Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Data Note
Santiago, Marina
Olesen, Scott W.
16S rRNA sequencing of samples from universal stool bank donors
title 16S rRNA sequencing of samples from universal stool bank donors
title_full 16S rRNA sequencing of samples from universal stool bank donors
title_fullStr 16S rRNA sequencing of samples from universal stool bank donors
title_full_unstemmed 16S rRNA sequencing of samples from universal stool bank donors
title_short 16S rRNA sequencing of samples from universal stool bank donors
title_sort 16s rrna sequencing of samples from universal stool bank donors
topic Data Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7988957/
https://www.ncbi.nlm.nih.gov/pubmed/33757553
http://dx.doi.org/10.1186/s13104-021-05520-z
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