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Automatic Subtyping of Individuals with Primary Progressive Aphasia

BACKGROUND: The classification of patients with primary progressive aphasia (PPA) into variants is time-consuming, costly, and requires combined expertise by clinical neurologists, neuropsychologists, speech pathologists, and radiologists. OBJECTIVE: The aim of the present study is to determine whet...

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Autores principales: Themistocleous, Charalambos, Ficek, Bronte, Webster, Kimberly, den Ouden, Dirk-Bart, Hillis, Argye E., Tsapkini, Kyrana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: IOS Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7990416/
https://www.ncbi.nlm.nih.gov/pubmed/33427742
http://dx.doi.org/10.3233/JAD-201101
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author Themistocleous, Charalambos
Ficek, Bronte
Webster, Kimberly
den Ouden, Dirk-Bart
Hillis, Argye E.
Tsapkini, Kyrana
author_facet Themistocleous, Charalambos
Ficek, Bronte
Webster, Kimberly
den Ouden, Dirk-Bart
Hillis, Argye E.
Tsapkini, Kyrana
author_sort Themistocleous, Charalambos
collection PubMed
description BACKGROUND: The classification of patients with primary progressive aphasia (PPA) into variants is time-consuming, costly, and requires combined expertise by clinical neurologists, neuropsychologists, speech pathologists, and radiologists. OBJECTIVE: The aim of the present study is to determine whether acoustic and linguistic variables provide accurate classification of PPA patients into one of three variants: nonfluent PPA, semantic PPA, and logopenic PPA. METHODS: In this paper, we present a machine learning model based on deep neural networks (DNN) for the subtyping of patients with PPA into three main variants, using combined acoustic and linguistic information elicited automatically via acoustic and linguistic analysis. The performance of the DNN was compared to the classification accuracy of Random Forests, Support Vector Machines, and Decision Trees, as well as to expert clinicians’ classifications. RESULTS: The DNN model outperformed the other machine learning models as well as expert clinicians’ classifications with 80% classification accuracy. Importantly, 90% of patients with nfvPPA and 95% of patients with lvPPA was identified correctly, providing reliable subtyping of these patients into their corresponding PPA variants. CONCLUSION: We show that the combined speech and language markers from connected speech productions can inform variant subtyping in patients with PPA. The end-to-end automated machine learning approach we present can enable clinicians and researchers to provide an easy, quick, and inexpensive classification of patients with PPA.
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spelling pubmed-79904162021-04-02 Automatic Subtyping of Individuals with Primary Progressive Aphasia Themistocleous, Charalambos Ficek, Bronte Webster, Kimberly den Ouden, Dirk-Bart Hillis, Argye E. Tsapkini, Kyrana J Alzheimers Dis Research Article BACKGROUND: The classification of patients with primary progressive aphasia (PPA) into variants is time-consuming, costly, and requires combined expertise by clinical neurologists, neuropsychologists, speech pathologists, and radiologists. OBJECTIVE: The aim of the present study is to determine whether acoustic and linguistic variables provide accurate classification of PPA patients into one of three variants: nonfluent PPA, semantic PPA, and logopenic PPA. METHODS: In this paper, we present a machine learning model based on deep neural networks (DNN) for the subtyping of patients with PPA into three main variants, using combined acoustic and linguistic information elicited automatically via acoustic and linguistic analysis. The performance of the DNN was compared to the classification accuracy of Random Forests, Support Vector Machines, and Decision Trees, as well as to expert clinicians’ classifications. RESULTS: The DNN model outperformed the other machine learning models as well as expert clinicians’ classifications with 80% classification accuracy. Importantly, 90% of patients with nfvPPA and 95% of patients with lvPPA was identified correctly, providing reliable subtyping of these patients into their corresponding PPA variants. CONCLUSION: We show that the combined speech and language markers from connected speech productions can inform variant subtyping in patients with PPA. The end-to-end automated machine learning approach we present can enable clinicians and researchers to provide an easy, quick, and inexpensive classification of patients with PPA. IOS Press 2021-02-02 /pmc/articles/PMC7990416/ /pubmed/33427742 http://dx.doi.org/10.3233/JAD-201101 Text en © 2021 – The authors. Published by IOS Press https://creativecommons.org/licenses/by-nc/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Non-Commercial (CC BY-NC 4.0) License (https://creativecommons.org/licenses/by-nc/4.0/) , which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Themistocleous, Charalambos
Ficek, Bronte
Webster, Kimberly
den Ouden, Dirk-Bart
Hillis, Argye E.
Tsapkini, Kyrana
Automatic Subtyping of Individuals with Primary Progressive Aphasia
title Automatic Subtyping of Individuals with Primary Progressive Aphasia
title_full Automatic Subtyping of Individuals with Primary Progressive Aphasia
title_fullStr Automatic Subtyping of Individuals with Primary Progressive Aphasia
title_full_unstemmed Automatic Subtyping of Individuals with Primary Progressive Aphasia
title_short Automatic Subtyping of Individuals with Primary Progressive Aphasia
title_sort automatic subtyping of individuals with primary progressive aphasia
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7990416/
https://www.ncbi.nlm.nih.gov/pubmed/33427742
http://dx.doi.org/10.3233/JAD-201101
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