Choice of library preparation affects sequence quality, genome assembly, and precise in silico prediction of virulence genes in shiga toxin-producing Escherichia coli

Whole genome sequencing (WGS) provides essential public health information and is used worldwide for pathogen surveillance, epidemiology, and source tracking. Foodborne pathogens are often sequenced using rapid library preparation chemistries based on transposon technology; however, this method may...

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Detalles Bibliográficos
Autores principales: Haendiges, Julie, Jinneman, Karen, Gonzalez-Escalona, Narjol
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7990515/
https://www.ncbi.nlm.nih.gov/pubmed/33761524
http://dx.doi.org/10.1371/journal.pone.0242294

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7990515/
https://www.ncbi.nlm.nih.gov/pubmed/33761524
http://dx.doi.org/10.1371/journal.pone.0242294

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