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Modeling of Symbiotic Bacterial Biofilm Growth with an Example of the Streptococcus–Veillonella sp. System
We present a multi-dimensional continuum mathematical model for modeling the growth of a symbiotic biofilm system. We take a dual-species namely, the Streptococcus–Veillonella sp. biofilm system as an example for numerical investigations. The presented model describes both the cooperation and compet...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7990864/ https://www.ncbi.nlm.nih.gov/pubmed/33760986 http://dx.doi.org/10.1007/s11538-021-00888-2 |
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author | Feng, Dianlei Neuweiler, Insa Nogueira, Regina Nackenhorst, Udo |
author_facet | Feng, Dianlei Neuweiler, Insa Nogueira, Regina Nackenhorst, Udo |
author_sort | Feng, Dianlei |
collection | PubMed |
description | We present a multi-dimensional continuum mathematical model for modeling the growth of a symbiotic biofilm system. We take a dual-species namely, the Streptococcus–Veillonella sp. biofilm system as an example for numerical investigations. The presented model describes both the cooperation and competition between these species of bacteria. The coupled partial differential equations are solved by using an integrative finite element numerical strategy. Numerical examples are carried out for studying the evolution and distribution of the bio-components. The results demonstrate that the presented model is capable of describing the symbiotic behavior of the biofilm system. However, homogenized numerical solutions are observed locally. To study the homogenization behavior of the model, numerical investigations regarding on how random initial biomass distribution influences the homogenization process are carried out. We found that a smaller correlation length of the initial biomass distribution leads to faster homogenization of the solution globally, however, shows more fluctuated biomass profiles along the biofilm thickness direction. More realistic scenarios with bacteria in patches are also investigated numerically in this study. |
format | Online Article Text |
id | pubmed-7990864 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-79908642021-04-16 Modeling of Symbiotic Bacterial Biofilm Growth with an Example of the Streptococcus–Veillonella sp. System Feng, Dianlei Neuweiler, Insa Nogueira, Regina Nackenhorst, Udo Bull Math Biol Original Article We present a multi-dimensional continuum mathematical model for modeling the growth of a symbiotic biofilm system. We take a dual-species namely, the Streptococcus–Veillonella sp. biofilm system as an example for numerical investigations. The presented model describes both the cooperation and competition between these species of bacteria. The coupled partial differential equations are solved by using an integrative finite element numerical strategy. Numerical examples are carried out for studying the evolution and distribution of the bio-components. The results demonstrate that the presented model is capable of describing the symbiotic behavior of the biofilm system. However, homogenized numerical solutions are observed locally. To study the homogenization behavior of the model, numerical investigations regarding on how random initial biomass distribution influences the homogenization process are carried out. We found that a smaller correlation length of the initial biomass distribution leads to faster homogenization of the solution globally, however, shows more fluctuated biomass profiles along the biofilm thickness direction. More realistic scenarios with bacteria in patches are also investigated numerically in this study. Springer US 2021-03-24 2021 /pmc/articles/PMC7990864/ /pubmed/33760986 http://dx.doi.org/10.1007/s11538-021-00888-2 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Article Feng, Dianlei Neuweiler, Insa Nogueira, Regina Nackenhorst, Udo Modeling of Symbiotic Bacterial Biofilm Growth with an Example of the Streptococcus–Veillonella sp. System |
title | Modeling of Symbiotic Bacterial Biofilm Growth with an Example of the Streptococcus–Veillonella sp. System |
title_full | Modeling of Symbiotic Bacterial Biofilm Growth with an Example of the Streptococcus–Veillonella sp. System |
title_fullStr | Modeling of Symbiotic Bacterial Biofilm Growth with an Example of the Streptococcus–Veillonella sp. System |
title_full_unstemmed | Modeling of Symbiotic Bacterial Biofilm Growth with an Example of the Streptococcus–Veillonella sp. System |
title_short | Modeling of Symbiotic Bacterial Biofilm Growth with an Example of the Streptococcus–Veillonella sp. System |
title_sort | modeling of symbiotic bacterial biofilm growth with an example of the streptococcus–veillonella sp. system |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7990864/ https://www.ncbi.nlm.nih.gov/pubmed/33760986 http://dx.doi.org/10.1007/s11538-021-00888-2 |
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