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Facilitating fine-grained intra-urban dengue forecasting by integrating urban environments measured from street-view images

BACKGROUND: Dengue fever (DF) is a mosquito-borne infectious disease that has threatened tropical and subtropical regions in recent decades. An early and targeted warning of a dengue epidemic is important for vector control. Current studies have primarily determined weather conditions to be the main...

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Autores principales: Liu, Kang, Yin, Ling, Zhang, Meng, Kang, Min, Deng, Ai-Ping, Li, Qing-Lan, Song, Tie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7992840/
https://www.ncbi.nlm.nih.gov/pubmed/33766145
http://dx.doi.org/10.1186/s40249-021-00824-5
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author Liu, Kang
Yin, Ling
Zhang, Meng
Kang, Min
Deng, Ai-Ping
Li, Qing-Lan
Song, Tie
author_facet Liu, Kang
Yin, Ling
Zhang, Meng
Kang, Min
Deng, Ai-Ping
Li, Qing-Lan
Song, Tie
author_sort Liu, Kang
collection PubMed
description BACKGROUND: Dengue fever (DF) is a mosquito-borne infectious disease that has threatened tropical and subtropical regions in recent decades. An early and targeted warning of a dengue epidemic is important for vector control. Current studies have primarily determined weather conditions to be the main factor for dengue forecasting, thereby neglecting that environmental suitability for mosquito breeding is also an important factor, especially in fine-grained intra-urban settings. Considering that street-view images are promising for depicting physical environments, this study proposes a framework for facilitating fine-grained intra-urban dengue forecasting by integrating the urban environments measured from street-view images. METHODS: The dengue epidemic that occurred in 167 townships of Guangzhou City, China, between 2015 and 2019 was taken as a study case. First, feature vectors of street-view images acquired inside each township were extracted by a pre-trained convolutional neural network, and then aggregated as an environmental feature vector of the township. Thus, townships with similar physical settings would exhibit similar environmental features. Second, the environmental feature vector is combined with commonly used features (e.g., temperature, rainfall, and past case count) as inputs to machine-learning models for weekly dengue forecasting. RESULTS: The performance of machine-learning forecasting models (i.e., MLP and SVM) integrated with and without environmental features were compared. This indicates that models integrating environmental features can identify high-risk urban units across the city more precisely than those using common features alone. In addition, the top 30% of high-risk townships predicted by our proposed methods can capture approximately 50–60% of dengue cases across the city. CONCLUSIONS: Incorporating local environments measured from street view images is effective in facilitating fine-grained intra-urban dengue forecasting, which is beneficial for conducting spatially precise dengue prevention and control. [Image: see text]
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spelling pubmed-79928402021-03-25 Facilitating fine-grained intra-urban dengue forecasting by integrating urban environments measured from street-view images Liu, Kang Yin, Ling Zhang, Meng Kang, Min Deng, Ai-Ping Li, Qing-Lan Song, Tie Infect Dis Poverty Research Article BACKGROUND: Dengue fever (DF) is a mosquito-borne infectious disease that has threatened tropical and subtropical regions in recent decades. An early and targeted warning of a dengue epidemic is important for vector control. Current studies have primarily determined weather conditions to be the main factor for dengue forecasting, thereby neglecting that environmental suitability for mosquito breeding is also an important factor, especially in fine-grained intra-urban settings. Considering that street-view images are promising for depicting physical environments, this study proposes a framework for facilitating fine-grained intra-urban dengue forecasting by integrating the urban environments measured from street-view images. METHODS: The dengue epidemic that occurred in 167 townships of Guangzhou City, China, between 2015 and 2019 was taken as a study case. First, feature vectors of street-view images acquired inside each township were extracted by a pre-trained convolutional neural network, and then aggregated as an environmental feature vector of the township. Thus, townships with similar physical settings would exhibit similar environmental features. Second, the environmental feature vector is combined with commonly used features (e.g., temperature, rainfall, and past case count) as inputs to machine-learning models for weekly dengue forecasting. RESULTS: The performance of machine-learning forecasting models (i.e., MLP and SVM) integrated with and without environmental features were compared. This indicates that models integrating environmental features can identify high-risk urban units across the city more precisely than those using common features alone. In addition, the top 30% of high-risk townships predicted by our proposed methods can capture approximately 50–60% of dengue cases across the city. CONCLUSIONS: Incorporating local environments measured from street view images is effective in facilitating fine-grained intra-urban dengue forecasting, which is beneficial for conducting spatially precise dengue prevention and control. [Image: see text] BioMed Central 2021-03-25 /pmc/articles/PMC7992840/ /pubmed/33766145 http://dx.doi.org/10.1186/s40249-021-00824-5 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Liu, Kang
Yin, Ling
Zhang, Meng
Kang, Min
Deng, Ai-Ping
Li, Qing-Lan
Song, Tie
Facilitating fine-grained intra-urban dengue forecasting by integrating urban environments measured from street-view images
title Facilitating fine-grained intra-urban dengue forecasting by integrating urban environments measured from street-view images
title_full Facilitating fine-grained intra-urban dengue forecasting by integrating urban environments measured from street-view images
title_fullStr Facilitating fine-grained intra-urban dengue forecasting by integrating urban environments measured from street-view images
title_full_unstemmed Facilitating fine-grained intra-urban dengue forecasting by integrating urban environments measured from street-view images
title_short Facilitating fine-grained intra-urban dengue forecasting by integrating urban environments measured from street-view images
title_sort facilitating fine-grained intra-urban dengue forecasting by integrating urban environments measured from street-view images
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7992840/
https://www.ncbi.nlm.nih.gov/pubmed/33766145
http://dx.doi.org/10.1186/s40249-021-00824-5
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