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Identification and validation of a glycolysis-associated multiomics prognostic model for hepatocellular carcinoma
Increased glycolysis has been reported as a major metabolic hallmark in many cancers, and is closely related to malignant behavior of tumors. However, the potential mechanism of glycolysis in hepatocellular carcinoma (HCC) and its prognostic value are not well understood. To address this, we investi...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7993684/ https://www.ncbi.nlm.nih.gov/pubmed/33686959 http://dx.doi.org/10.18632/aging.202613 |
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author | Deng, Tuo Ye, Qian Jin, Chen Wu, Mingliang Chen, Kaiyu Yang, Jinhuan Chen, Ziyan Yu, XiXiang Chen, Gang Wang, Yi |
author_facet | Deng, Tuo Ye, Qian Jin, Chen Wu, Mingliang Chen, Kaiyu Yang, Jinhuan Chen, Ziyan Yu, XiXiang Chen, Gang Wang, Yi |
author_sort | Deng, Tuo |
collection | PubMed |
description | Increased glycolysis has been reported as a major metabolic hallmark in many cancers, and is closely related to malignant behavior of tumors. However, the potential mechanism of glycolysis in hepatocellular carcinoma (HCC) and its prognostic value are not well understood. To address this, we investigated glycolysis-related gene expression data of patients with HCC from TCGA and ICGC. Patients were categorized into three different glycolysis-associated subgroups: Glycolysis-M, Glycolysis-H, and Glycolysis-L. We found that Glycolysis-H combined with Glycolysis-M (Glycolysis-H+M) subgroup was associated with poor overall survival and distinct cancer stem cell characteristics and immune infiltrate patterns. Additionally, multiomics-based analyses were conducted to evaluate genomic patterns of glycolysis subgroups, including their gene mutations, copy number variations, and RNA-sequencing data. Finally, a glycolysis-associated multiomics prognostic model (GMPM) consisting of 19 glycolysis-associated genes was developed. The capability of GMPM in categorizing patients with HCC into high- and low-risk groups was validated with independent HCC datasets. Finally, GMPM was confirmed as an independent risk factor for the prognosis of patients with HCC. We believe that our findings provide new insights into the mechanism of glycolysis and highlight the potential clinical value of GMPM in predicting the prognosis of patients with HCC. |
format | Online Article Text |
id | pubmed-7993684 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-79936842021-04-06 Identification and validation of a glycolysis-associated multiomics prognostic model for hepatocellular carcinoma Deng, Tuo Ye, Qian Jin, Chen Wu, Mingliang Chen, Kaiyu Yang, Jinhuan Chen, Ziyan Yu, XiXiang Chen, Gang Wang, Yi Aging (Albany NY) Research Paper Increased glycolysis has been reported as a major metabolic hallmark in many cancers, and is closely related to malignant behavior of tumors. However, the potential mechanism of glycolysis in hepatocellular carcinoma (HCC) and its prognostic value are not well understood. To address this, we investigated glycolysis-related gene expression data of patients with HCC from TCGA and ICGC. Patients were categorized into three different glycolysis-associated subgroups: Glycolysis-M, Glycolysis-H, and Glycolysis-L. We found that Glycolysis-H combined with Glycolysis-M (Glycolysis-H+M) subgroup was associated with poor overall survival and distinct cancer stem cell characteristics and immune infiltrate patterns. Additionally, multiomics-based analyses were conducted to evaluate genomic patterns of glycolysis subgroups, including their gene mutations, copy number variations, and RNA-sequencing data. Finally, a glycolysis-associated multiomics prognostic model (GMPM) consisting of 19 glycolysis-associated genes was developed. The capability of GMPM in categorizing patients with HCC into high- and low-risk groups was validated with independent HCC datasets. Finally, GMPM was confirmed as an independent risk factor for the prognosis of patients with HCC. We believe that our findings provide new insights into the mechanism of glycolysis and highlight the potential clinical value of GMPM in predicting the prognosis of patients with HCC. Impact Journals 2021-03-03 /pmc/articles/PMC7993684/ /pubmed/33686959 http://dx.doi.org/10.18632/aging.202613 Text en Copyright: © 2021 Deng et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Deng, Tuo Ye, Qian Jin, Chen Wu, Mingliang Chen, Kaiyu Yang, Jinhuan Chen, Ziyan Yu, XiXiang Chen, Gang Wang, Yi Identification and validation of a glycolysis-associated multiomics prognostic model for hepatocellular carcinoma |
title | Identification and validation of a glycolysis-associated multiomics prognostic model for hepatocellular carcinoma |
title_full | Identification and validation of a glycolysis-associated multiomics prognostic model for hepatocellular carcinoma |
title_fullStr | Identification and validation of a glycolysis-associated multiomics prognostic model for hepatocellular carcinoma |
title_full_unstemmed | Identification and validation of a glycolysis-associated multiomics prognostic model for hepatocellular carcinoma |
title_short | Identification and validation of a glycolysis-associated multiomics prognostic model for hepatocellular carcinoma |
title_sort | identification and validation of a glycolysis-associated multiomics prognostic model for hepatocellular carcinoma |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7993684/ https://www.ncbi.nlm.nih.gov/pubmed/33686959 http://dx.doi.org/10.18632/aging.202613 |
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