Cargando…
Low expression of NLRP1 is associated with a poor prognosis and immune infiltration in lung adenocarcinoma patients
NLRP1 (NLR family, pyrin domain containing 1), the first NLR protein, described to form an inflammasome, plays critical roles in innate immunity and inflammation. However, NLRP1 has not been reported to be linked to LUAD (lung adenocarcinoma) risk, prognosis, immunotherapy or any other treatments. T...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7993699/ https://www.ncbi.nlm.nih.gov/pubmed/33658393 http://dx.doi.org/10.18632/aging.202620 |
_version_ | 1783669606041255936 |
---|---|
author | Shen, Edward Han, Ying Cai, Changjing Liu, Ping Chen, Yihong Gao, Le Huang, Qiaoqiao Shen, Hong Zeng, Shan He, Min |
author_facet | Shen, Edward Han, Ying Cai, Changjing Liu, Ping Chen, Yihong Gao, Le Huang, Qiaoqiao Shen, Hong Zeng, Shan He, Min |
author_sort | Shen, Edward |
collection | PubMed |
description | NLRP1 (NLR family, pyrin domain containing 1), the first NLR protein, described to form an inflammasome, plays critical roles in innate immunity and inflammation. However, NLRP1 has not been reported to be linked to LUAD (lung adenocarcinoma) risk, prognosis, immunotherapy or any other treatments. This research aimed to explore the prognostic value and mechanism of NLRP1 in LUAD. We performed bioinformatics analysis on LUAD data downloaded from TCGA (The Cancer Genome Atlas) and GEO (Gene Expression Omnibus), and jointly analyzed with online databases such as TCGAportal, LinkedOmics, TIMER, ESTIMATE and TISIDB. NLRP1 expression of LUAD tissue was considerably lower than that in normal lung tissue. Decreased NLRP1 expression of LUAD was associated with relatively high pathological, T and N stages. Kaplan-Meier survival analysis indicated that patients with low NLRP1 expression had a worse prognosis than those with high expression. Multivariate Cox analysis further showed that NLRP1 expression level was an independent prognostic factor of LUAD. Moreover, the level of NLRP1 expression was positively linked to the degree of infiltration of various TIICs (tumor-infiltrating immune cells). Our findings confirmed that reduced expression of NLRP1 was significantly related to poor prognosis and low degree of immune cell infiltration in LUAD patients. |
format | Online Article Text |
id | pubmed-7993699 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-79936992021-04-06 Low expression of NLRP1 is associated with a poor prognosis and immune infiltration in lung adenocarcinoma patients Shen, Edward Han, Ying Cai, Changjing Liu, Ping Chen, Yihong Gao, Le Huang, Qiaoqiao Shen, Hong Zeng, Shan He, Min Aging (Albany NY) Research Paper NLRP1 (NLR family, pyrin domain containing 1), the first NLR protein, described to form an inflammasome, plays critical roles in innate immunity and inflammation. However, NLRP1 has not been reported to be linked to LUAD (lung adenocarcinoma) risk, prognosis, immunotherapy or any other treatments. This research aimed to explore the prognostic value and mechanism of NLRP1 in LUAD. We performed bioinformatics analysis on LUAD data downloaded from TCGA (The Cancer Genome Atlas) and GEO (Gene Expression Omnibus), and jointly analyzed with online databases such as TCGAportal, LinkedOmics, TIMER, ESTIMATE and TISIDB. NLRP1 expression of LUAD tissue was considerably lower than that in normal lung tissue. Decreased NLRP1 expression of LUAD was associated with relatively high pathological, T and N stages. Kaplan-Meier survival analysis indicated that patients with low NLRP1 expression had a worse prognosis than those with high expression. Multivariate Cox analysis further showed that NLRP1 expression level was an independent prognostic factor of LUAD. Moreover, the level of NLRP1 expression was positively linked to the degree of infiltration of various TIICs (tumor-infiltrating immune cells). Our findings confirmed that reduced expression of NLRP1 was significantly related to poor prognosis and low degree of immune cell infiltration in LUAD patients. Impact Journals 2021-03-03 /pmc/articles/PMC7993699/ /pubmed/33658393 http://dx.doi.org/10.18632/aging.202620 Text en Copyright: © 2021 Shen et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Shen, Edward Han, Ying Cai, Changjing Liu, Ping Chen, Yihong Gao, Le Huang, Qiaoqiao Shen, Hong Zeng, Shan He, Min Low expression of NLRP1 is associated with a poor prognosis and immune infiltration in lung adenocarcinoma patients |
title | Low expression of NLRP1 is associated with a poor prognosis and immune infiltration in lung adenocarcinoma patients |
title_full | Low expression of NLRP1 is associated with a poor prognosis and immune infiltration in lung adenocarcinoma patients |
title_fullStr | Low expression of NLRP1 is associated with a poor prognosis and immune infiltration in lung adenocarcinoma patients |
title_full_unstemmed | Low expression of NLRP1 is associated with a poor prognosis and immune infiltration in lung adenocarcinoma patients |
title_short | Low expression of NLRP1 is associated with a poor prognosis and immune infiltration in lung adenocarcinoma patients |
title_sort | low expression of nlrp1 is associated with a poor prognosis and immune infiltration in lung adenocarcinoma patients |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7993699/ https://www.ncbi.nlm.nih.gov/pubmed/33658393 http://dx.doi.org/10.18632/aging.202620 |
work_keys_str_mv | AT shenedward lowexpressionofnlrp1isassociatedwithapoorprognosisandimmuneinfiltrationinlungadenocarcinomapatients AT hanying lowexpressionofnlrp1isassociatedwithapoorprognosisandimmuneinfiltrationinlungadenocarcinomapatients AT caichangjing lowexpressionofnlrp1isassociatedwithapoorprognosisandimmuneinfiltrationinlungadenocarcinomapatients AT liuping lowexpressionofnlrp1isassociatedwithapoorprognosisandimmuneinfiltrationinlungadenocarcinomapatients AT chenyihong lowexpressionofnlrp1isassociatedwithapoorprognosisandimmuneinfiltrationinlungadenocarcinomapatients AT gaole lowexpressionofnlrp1isassociatedwithapoorprognosisandimmuneinfiltrationinlungadenocarcinomapatients AT huangqiaoqiao lowexpressionofnlrp1isassociatedwithapoorprognosisandimmuneinfiltrationinlungadenocarcinomapatients AT shenhong lowexpressionofnlrp1isassociatedwithapoorprognosisandimmuneinfiltrationinlungadenocarcinomapatients AT zengshan lowexpressionofnlrp1isassociatedwithapoorprognosisandimmuneinfiltrationinlungadenocarcinomapatients AT hemin lowexpressionofnlrp1isassociatedwithapoorprognosisandimmuneinfiltrationinlungadenocarcinomapatients |