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Imaging Study of Pseudo-CT Synthesized From Cone-Beam CT Based on 3D CycleGAN in Radiotherapy
PURPOSE: To propose a synthesis method of pseudo-CT (CT(CycleGAN)) images based on an improved 3D cycle generative adversarial network (CycleGAN) to solve the limitations of cone-beam CT (CBCT), which cannot be directly applied to the correction of radiotherapy plans. METHODS: The improved U-Net wit...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7994515/ https://www.ncbi.nlm.nih.gov/pubmed/33777746 http://dx.doi.org/10.3389/fonc.2021.603844 |
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author | Sun, Hongfei Fan, Rongbo Li, Chunying Lu, Zhengda Xie, Kai Ni, Xinye Yang, Jianhua |
author_facet | Sun, Hongfei Fan, Rongbo Li, Chunying Lu, Zhengda Xie, Kai Ni, Xinye Yang, Jianhua |
author_sort | Sun, Hongfei |
collection | PubMed |
description | PURPOSE: To propose a synthesis method of pseudo-CT (CT(CycleGAN)) images based on an improved 3D cycle generative adversarial network (CycleGAN) to solve the limitations of cone-beam CT (CBCT), which cannot be directly applied to the correction of radiotherapy plans. METHODS: The improved U-Net with residual connection and attention gates was used as the generator, and the discriminator was a full convolutional neural network (FCN). The imaging quality of pseudo-CT images is improved by adding a 3D gradient loss function. Fivefold cross-validation was performed to validate our model. Each pseudo CT generated is compared against the real CT image (ground truth CT, CT(gt)) of the same patient based on mean absolute error (MAE) and structural similarity index (SSIM). The dice similarity coefficient (DSC) coefficient was used to evaluate the segmentation results of pseudo CT and real CT. 3D CycleGAN performance was compared to 2D CycleGAN based on normalized mutual information (NMI) and peak signal-to-noise ratio (PSNR) metrics between the pseudo-CT and CT(gt) images. The dosimetric accuracy of pseudo-CT images was evaluated by gamma analysis. RESULTS: The MAE metric values between the CT(CycleGAN) and the real CT in fivefold cross-validation are 52.03 ± 4.26HU, 50.69 ± 5.25HU, 52.48 ± 4.42HU, 51.27 ± 4.56HU, and 51.65 ± 3.97HU, respectively, and the SSIM values are 0.87 ± 0.02, 0.86 ± 0.03, 0.85 ± 0.02, 0.85 ± 0.03, and 0.87 ± 0.03 respectively. The DSC values of the segmentation of bladder, cervix, rectum, and bone between CT(CycleGAN) and real CT images are 91.58 ± 0.45, 88.14 ± 1.26, 87.23 ± 2.01, and 92.59 ± 0.33, respectively. Compared with 2D CycleGAN, the 3D CycleGAN based pseudo-CT image is closer to the real image, with NMI values of 0.90 ± 0.01 and PSNR values of 30.70 ± 0.78. The gamma pass rate of the dose distribution between CT(CycleGAN) and CT(gt) is 97.0% (2%/2 mm). CONCLUSION: The pseudo-CT images obtained based on the improved 3D CycleGAN have more accurate electronic density and anatomical structure. |
format | Online Article Text |
id | pubmed-7994515 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-79945152021-03-27 Imaging Study of Pseudo-CT Synthesized From Cone-Beam CT Based on 3D CycleGAN in Radiotherapy Sun, Hongfei Fan, Rongbo Li, Chunying Lu, Zhengda Xie, Kai Ni, Xinye Yang, Jianhua Front Oncol Oncology PURPOSE: To propose a synthesis method of pseudo-CT (CT(CycleGAN)) images based on an improved 3D cycle generative adversarial network (CycleGAN) to solve the limitations of cone-beam CT (CBCT), which cannot be directly applied to the correction of radiotherapy plans. METHODS: The improved U-Net with residual connection and attention gates was used as the generator, and the discriminator was a full convolutional neural network (FCN). The imaging quality of pseudo-CT images is improved by adding a 3D gradient loss function. Fivefold cross-validation was performed to validate our model. Each pseudo CT generated is compared against the real CT image (ground truth CT, CT(gt)) of the same patient based on mean absolute error (MAE) and structural similarity index (SSIM). The dice similarity coefficient (DSC) coefficient was used to evaluate the segmentation results of pseudo CT and real CT. 3D CycleGAN performance was compared to 2D CycleGAN based on normalized mutual information (NMI) and peak signal-to-noise ratio (PSNR) metrics between the pseudo-CT and CT(gt) images. The dosimetric accuracy of pseudo-CT images was evaluated by gamma analysis. RESULTS: The MAE metric values between the CT(CycleGAN) and the real CT in fivefold cross-validation are 52.03 ± 4.26HU, 50.69 ± 5.25HU, 52.48 ± 4.42HU, 51.27 ± 4.56HU, and 51.65 ± 3.97HU, respectively, and the SSIM values are 0.87 ± 0.02, 0.86 ± 0.03, 0.85 ± 0.02, 0.85 ± 0.03, and 0.87 ± 0.03 respectively. The DSC values of the segmentation of bladder, cervix, rectum, and bone between CT(CycleGAN) and real CT images are 91.58 ± 0.45, 88.14 ± 1.26, 87.23 ± 2.01, and 92.59 ± 0.33, respectively. Compared with 2D CycleGAN, the 3D CycleGAN based pseudo-CT image is closer to the real image, with NMI values of 0.90 ± 0.01 and PSNR values of 30.70 ± 0.78. The gamma pass rate of the dose distribution between CT(CycleGAN) and CT(gt) is 97.0% (2%/2 mm). CONCLUSION: The pseudo-CT images obtained based on the improved 3D CycleGAN have more accurate electronic density and anatomical structure. Frontiers Media S.A. 2021-03-12 /pmc/articles/PMC7994515/ /pubmed/33777746 http://dx.doi.org/10.3389/fonc.2021.603844 Text en Copyright © 2021 Sun, Fan, Li, Lu, Xie, Ni and Yang http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Sun, Hongfei Fan, Rongbo Li, Chunying Lu, Zhengda Xie, Kai Ni, Xinye Yang, Jianhua Imaging Study of Pseudo-CT Synthesized From Cone-Beam CT Based on 3D CycleGAN in Radiotherapy |
title | Imaging Study of Pseudo-CT Synthesized From Cone-Beam CT Based on 3D CycleGAN in Radiotherapy |
title_full | Imaging Study of Pseudo-CT Synthesized From Cone-Beam CT Based on 3D CycleGAN in Radiotherapy |
title_fullStr | Imaging Study of Pseudo-CT Synthesized From Cone-Beam CT Based on 3D CycleGAN in Radiotherapy |
title_full_unstemmed | Imaging Study of Pseudo-CT Synthesized From Cone-Beam CT Based on 3D CycleGAN in Radiotherapy |
title_short | Imaging Study of Pseudo-CT Synthesized From Cone-Beam CT Based on 3D CycleGAN in Radiotherapy |
title_sort | imaging study of pseudo-ct synthesized from cone-beam ct based on 3d cyclegan in radiotherapy |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7994515/ https://www.ncbi.nlm.nih.gov/pubmed/33777746 http://dx.doi.org/10.3389/fonc.2021.603844 |
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