The complete chloroplast genome of Cephalotaxus lanceolata (Taxaceae), a plant species with extremely small populations

Cephalotaxus lanceolata K. M. Feng ex C. Y. Cheng W. C. Cheng and L. K. Fu (Taxaceae) is a threatened plant species and a typical plant species with extremely small populations (PSESP) with only four individuals found in Gaoligong Mountain. With the aim of providing data for future conservation effo...

Descripción completa

Detalles Bibliográficos
Autores principales: Ge, Jia, Xiong, Yun, Luo, Guifen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995812/
https://www.ncbi.nlm.nih.gov/pubmed/33796759
http://dx.doi.org/10.1080/23802359.2021.1901621
_version_ 1783669985711751168
author Ge, Jia
Xiong, Yun
Luo, Guifen
author_facet Ge, Jia
Xiong, Yun
Luo, Guifen
author_sort Ge, Jia
collection PubMed
description Cephalotaxus lanceolata K. M. Feng ex C. Y. Cheng W. C. Cheng and L. K. Fu (Taxaceae) is a threatened plant species and a typical plant species with extremely small populations (PSESP) with only four individuals found in Gaoligong Mountain. With the aim of providing data for future conservation efforts, we sequenced the whole chloroplast (cp) genome of C. lanceolata. The results showed that the plastid genome is 136,404 bp in size. In total, 116 unique genes were annotated, including 83 protein-coding genes, 29 tRNA genes, and 4 rRNA genes. The total GC content was 35.1%. We performed phylogenetic analyses based on 12 cp genomes of Taxaceae, and we determined that the genus Cephalotaxus forms a sister group to Taxus and Pseudotaxus.
format Online
Article
Text
id pubmed-7995812
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-79958122021-03-31 The complete chloroplast genome of Cephalotaxus lanceolata (Taxaceae), a plant species with extremely small populations Ge, Jia Xiong, Yun Luo, Guifen Mitochondrial DNA B Resour Mitogenome Announcement Cephalotaxus lanceolata K. M. Feng ex C. Y. Cheng W. C. Cheng and L. K. Fu (Taxaceae) is a threatened plant species and a typical plant species with extremely small populations (PSESP) with only four individuals found in Gaoligong Mountain. With the aim of providing data for future conservation efforts, we sequenced the whole chloroplast (cp) genome of C. lanceolata. The results showed that the plastid genome is 136,404 bp in size. In total, 116 unique genes were annotated, including 83 protein-coding genes, 29 tRNA genes, and 4 rRNA genes. The total GC content was 35.1%. We performed phylogenetic analyses based on 12 cp genomes of Taxaceae, and we determined that the genus Cephalotaxus forms a sister group to Taxus and Pseudotaxus. Taylor & Francis 2021-03-19 /pmc/articles/PMC7995812/ /pubmed/33796759 http://dx.doi.org/10.1080/23802359.2021.1901621 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Ge, Jia
Xiong, Yun
Luo, Guifen
The complete chloroplast genome of Cephalotaxus lanceolata (Taxaceae), a plant species with extremely small populations
title The complete chloroplast genome of Cephalotaxus lanceolata (Taxaceae), a plant species with extremely small populations
title_full The complete chloroplast genome of Cephalotaxus lanceolata (Taxaceae), a plant species with extremely small populations
title_fullStr The complete chloroplast genome of Cephalotaxus lanceolata (Taxaceae), a plant species with extremely small populations
title_full_unstemmed The complete chloroplast genome of Cephalotaxus lanceolata (Taxaceae), a plant species with extremely small populations
title_short The complete chloroplast genome of Cephalotaxus lanceolata (Taxaceae), a plant species with extremely small populations
title_sort complete chloroplast genome of cephalotaxus lanceolata (taxaceae), a plant species with extremely small populations
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995812/
https://www.ncbi.nlm.nih.gov/pubmed/33796759
http://dx.doi.org/10.1080/23802359.2021.1901621
work_keys_str_mv AT gejia thecompletechloroplastgenomeofcephalotaxuslanceolatataxaceaeaplantspecieswithextremelysmallpopulations
AT xiongyun thecompletechloroplastgenomeofcephalotaxuslanceolatataxaceaeaplantspecieswithextremelysmallpopulations
AT luoguifen thecompletechloroplastgenomeofcephalotaxuslanceolatataxaceaeaplantspecieswithextremelysmallpopulations
AT gejia completechloroplastgenomeofcephalotaxuslanceolatataxaceaeaplantspecieswithextremelysmallpopulations
AT xiongyun completechloroplastgenomeofcephalotaxuslanceolatataxaceaeaplantspecieswithextremelysmallpopulations
AT luoguifen completechloroplastgenomeofcephalotaxuslanceolatataxaceaeaplantspecieswithextremelysmallpopulations

Ejemplares similares