The complete chloroplast genome of Berberis weiningensis (Berberidaceae), an endemic and traditional Chinese medicinal herb

Berberis weiningensis is a frequently-used traditional Chinese medicinal herb that included various active alkaloids. In this study, we assembled the complete chloroplast (cp) genome of B. weiningensis. The complete cp genome of B. weiningensis is 166,275 bp in length, and has a typical structure wi...

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Autores principales: Feng, Tu, Xiao, Qun-Ying, Li, Wang-Jun, Zhang, Chun, He, Yang, Fan, Gang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995825/
https://www.ncbi.nlm.nih.gov/pubmed/33796777
http://dx.doi.org/10.1080/23802359.2021.1901625
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author Feng, Tu
Xiao, Qun-Ying
Li, Wang-Jun
Zhang, Chun
He, Yang
Fan, Gang
author_facet Feng, Tu
Xiao, Qun-Ying
Li, Wang-Jun
Zhang, Chun
He, Yang
Fan, Gang
author_sort Feng, Tu
collection PubMed
description Berberis weiningensis is a frequently-used traditional Chinese medicinal herb that included various active alkaloids. In this study, we assembled the complete chloroplast (cp) genome of B. weiningensis. The complete cp genome of B. weiningensis is 166,275 bp in length, and has a typical structure with large single-copy (LSC 73,624 bp) and small single-copy (SSC 18,608 bp) regions separated by a pair of inverted repeats (IRs 37,019 bp) of large size. The B. weiningensis cp genome contains 147 genes, of which 101 protein-coding genes, 8 rRNA genes, and 38 tRNA genes. The phylogenetic analysis revealed that Berberis species closely clustered with Mahonia species, which obviously support that Mahonia and Berberis are not monophyletic.
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spelling pubmed-79958252021-03-31 The complete chloroplast genome of Berberis weiningensis (Berberidaceae), an endemic and traditional Chinese medicinal herb Feng, Tu Xiao, Qun-Ying Li, Wang-Jun Zhang, Chun He, Yang Fan, Gang Mitochondrial DNA B Resour Mitogenome Announcement Berberis weiningensis is a frequently-used traditional Chinese medicinal herb that included various active alkaloids. In this study, we assembled the complete chloroplast (cp) genome of B. weiningensis. The complete cp genome of B. weiningensis is 166,275 bp in length, and has a typical structure with large single-copy (LSC 73,624 bp) and small single-copy (SSC 18,608 bp) regions separated by a pair of inverted repeats (IRs 37,019 bp) of large size. The B. weiningensis cp genome contains 147 genes, of which 101 protein-coding genes, 8 rRNA genes, and 38 tRNA genes. The phylogenetic analysis revealed that Berberis species closely clustered with Mahonia species, which obviously support that Mahonia and Berberis are not monophyletic. Taylor & Francis 2021-03-24 /pmc/articles/PMC7995825/ /pubmed/33796777 http://dx.doi.org/10.1080/23802359.2021.1901625 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Feng, Tu
Xiao, Qun-Ying
Li, Wang-Jun
Zhang, Chun
He, Yang
Fan, Gang
The complete chloroplast genome of Berberis weiningensis (Berberidaceae), an endemic and traditional Chinese medicinal herb
title The complete chloroplast genome of Berberis weiningensis (Berberidaceae), an endemic and traditional Chinese medicinal herb
title_full The complete chloroplast genome of Berberis weiningensis (Berberidaceae), an endemic and traditional Chinese medicinal herb
title_fullStr The complete chloroplast genome of Berberis weiningensis (Berberidaceae), an endemic and traditional Chinese medicinal herb
title_full_unstemmed The complete chloroplast genome of Berberis weiningensis (Berberidaceae), an endemic and traditional Chinese medicinal herb
title_short The complete chloroplast genome of Berberis weiningensis (Berberidaceae), an endemic and traditional Chinese medicinal herb
title_sort complete chloroplast genome of berberis weiningensis (berberidaceae), an endemic and traditional chinese medicinal herb
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995825/
https://www.ncbi.nlm.nih.gov/pubmed/33796777
http://dx.doi.org/10.1080/23802359.2021.1901625
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