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Complete mitochondrial genome and phylogenetic analysis of Schizothorax sinensis (Teleostei: Cypriniformes: Cyprinidae)

This study describes the first sequencing of the complete mitochondrial genome of Schizothorax sinensis, a species of cyprinid snowtrout from the Jialing River and Fujiang River basins in China’s Sichuan Province. The total length is 16,571 base pairs. Similar to most Schizothoracinae mitochondrial...

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Autores principales: Chen, Deng, Fu, Changkun, Lei, Ziyong, Li, Yuhao, Zhao, Tianmeng, Fan, Hailing, Hu, Tao, Wang, Qian, Zong, Hao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995835/
https://www.ncbi.nlm.nih.gov/pubmed/33796760
http://dx.doi.org/10.1080/23802359.2021.1901622
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author Chen, Deng
Fu, Changkun
Lei, Ziyong
Li, Yuhao
Zhao, Tianmeng
Fan, Hailing
Hu, Tao
Wang, Qian
Zong, Hao
author_facet Chen, Deng
Fu, Changkun
Lei, Ziyong
Li, Yuhao
Zhao, Tianmeng
Fan, Hailing
Hu, Tao
Wang, Qian
Zong, Hao
author_sort Chen, Deng
collection PubMed
description This study describes the first sequencing of the complete mitochondrial genome of Schizothorax sinensis, a species of cyprinid snowtrout from the Jialing River and Fujiang River basins in China’s Sichuan Province. The total length is 16,571 base pairs. Similar to most Schizothoracinae mitochondrial genomes, there are 37 genes including 13 protein coding genes, 22 transfer RNA genes and 2 ribosomal RNA genes. In addition, it contains a control region rich in A-T nucleotides. The overall nucleotide composition is 29.6% for A, 27.1% for C, 17.9% for G and 25.4% for T, and the percentage of GC content is 45.0%. Phylogenetic analysis suggested that Schizothorax sinensis and Schizothorax prenanti clustered together in a clade. This work provides additional molecular information for studying Schizothorax sinensis conservation genetics and evolutionary relationships.
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spelling pubmed-79958352021-03-31 Complete mitochondrial genome and phylogenetic analysis of Schizothorax sinensis (Teleostei: Cypriniformes: Cyprinidae) Chen, Deng Fu, Changkun Lei, Ziyong Li, Yuhao Zhao, Tianmeng Fan, Hailing Hu, Tao Wang, Qian Zong, Hao Mitochondrial DNA B Resour Mitogenome Announcement This study describes the first sequencing of the complete mitochondrial genome of Schizothorax sinensis, a species of cyprinid snowtrout from the Jialing River and Fujiang River basins in China’s Sichuan Province. The total length is 16,571 base pairs. Similar to most Schizothoracinae mitochondrial genomes, there are 37 genes including 13 protein coding genes, 22 transfer RNA genes and 2 ribosomal RNA genes. In addition, it contains a control region rich in A-T nucleotides. The overall nucleotide composition is 29.6% for A, 27.1% for C, 17.9% for G and 25.4% for T, and the percentage of GC content is 45.0%. Phylogenetic analysis suggested that Schizothorax sinensis and Schizothorax prenanti clustered together in a clade. This work provides additional molecular information for studying Schizothorax sinensis conservation genetics and evolutionary relationships. Taylor & Francis 2021-03-19 /pmc/articles/PMC7995835/ /pubmed/33796760 http://dx.doi.org/10.1080/23802359.2021.1901622 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Chen, Deng
Fu, Changkun
Lei, Ziyong
Li, Yuhao
Zhao, Tianmeng
Fan, Hailing
Hu, Tao
Wang, Qian
Zong, Hao
Complete mitochondrial genome and phylogenetic analysis of Schizothorax sinensis (Teleostei: Cypriniformes: Cyprinidae)
title Complete mitochondrial genome and phylogenetic analysis of Schizothorax sinensis (Teleostei: Cypriniformes: Cyprinidae)
title_full Complete mitochondrial genome and phylogenetic analysis of Schizothorax sinensis (Teleostei: Cypriniformes: Cyprinidae)
title_fullStr Complete mitochondrial genome and phylogenetic analysis of Schizothorax sinensis (Teleostei: Cypriniformes: Cyprinidae)
title_full_unstemmed Complete mitochondrial genome and phylogenetic analysis of Schizothorax sinensis (Teleostei: Cypriniformes: Cyprinidae)
title_short Complete mitochondrial genome and phylogenetic analysis of Schizothorax sinensis (Teleostei: Cypriniformes: Cyprinidae)
title_sort complete mitochondrial genome and phylogenetic analysis of schizothorax sinensis (teleostei: cypriniformes: cyprinidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995835/
https://www.ncbi.nlm.nih.gov/pubmed/33796760
http://dx.doi.org/10.1080/23802359.2021.1901622
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