The complete chloroplast genome of Viola philippica (Violaceae)

Viola philippica, as a traditional Chinese medicine, has great value in treating various diseases. Here, we report the chloroplast genome of V. philippica and its phylogenetic feature. The complete chloroplast genome is 156,744 bp in length, assembled from 22,346,570 reads, and its GC contents ratio...

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Autores principales: Yi, Yuqi, Lin, Pingping, Ruan, Jiaqi, Rohani, Emelda Rosseleena, Han, Rongchun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995846/
https://www.ncbi.nlm.nih.gov/pubmed/33796720
http://dx.doi.org/10.1080/23802359.2021.1894998
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author Yi, Yuqi
Lin, Pingping
Ruan, Jiaqi
Rohani, Emelda Rosseleena
Han, Rongchun
author_facet Yi, Yuqi
Lin, Pingping
Ruan, Jiaqi
Rohani, Emelda Rosseleena
Han, Rongchun
author_sort Yi, Yuqi
collection PubMed
description Viola philippica, as a traditional Chinese medicine, has great value in treating various diseases. Here, we report the chloroplast genome of V. philippica and its phylogenetic feature. The complete chloroplast genome is 156,744 bp in length, assembled from 22,346,570 reads, and its GC contents ratio is 36.26%. Its long single-copy (LSC) region is 85,892 bp. The small single-copy (SSC) region covers 18,006 bp and inverted repeat (IR) is 26,423 bp. It encodes 77 genes, including 43 protein genes, 4 rRNA genes, and 30 tRNA genes. Moreover, according to the phylogenetic analysis for a total of 12 chloroplast sequences, V. philippica demonstrated close relationship within genus Viola.
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spelling pubmed-79958462021-03-31 The complete chloroplast genome of Viola philippica (Violaceae) Yi, Yuqi Lin, Pingping Ruan, Jiaqi Rohani, Emelda Rosseleena Han, Rongchun Mitochondrial DNA B Resour Mitogenome Announcement Viola philippica, as a traditional Chinese medicine, has great value in treating various diseases. Here, we report the chloroplast genome of V. philippica and its phylogenetic feature. The complete chloroplast genome is 156,744 bp in length, assembled from 22,346,570 reads, and its GC contents ratio is 36.26%. Its long single-copy (LSC) region is 85,892 bp. The small single-copy (SSC) region covers 18,006 bp and inverted repeat (IR) is 26,423 bp. It encodes 77 genes, including 43 protein genes, 4 rRNA genes, and 30 tRNA genes. Moreover, according to the phylogenetic analysis for a total of 12 chloroplast sequences, V. philippica demonstrated close relationship within genus Viola. Taylor & Francis 2021-03-24 /pmc/articles/PMC7995846/ /pubmed/33796720 http://dx.doi.org/10.1080/23802359.2021.1894998 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yi, Yuqi
Lin, Pingping
Ruan, Jiaqi
Rohani, Emelda Rosseleena
Han, Rongchun
The complete chloroplast genome of Viola philippica (Violaceae)
title The complete chloroplast genome of Viola philippica (Violaceae)
title_full The complete chloroplast genome of Viola philippica (Violaceae)
title_fullStr The complete chloroplast genome of Viola philippica (Violaceae)
title_full_unstemmed The complete chloroplast genome of Viola philippica (Violaceae)
title_short The complete chloroplast genome of Viola philippica (Violaceae)
title_sort complete chloroplast genome of viola philippica (violaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995846/
https://www.ncbi.nlm.nih.gov/pubmed/33796720
http://dx.doi.org/10.1080/23802359.2021.1894998
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