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Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775)

The complete mitochondrial genome of convex reef crab Carpilius convexus was determined and characterized for the first time from the South China Sea. The whole mitogenome is 15,766 bp long and consists of 22 tRNA genes, 2 rRNA genes, 13 protein-coding genes (PCGs), and 1 control region. The nucleot...

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Autores principales: Liu, Hongtao, Li, Bingshun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995858/
https://www.ncbi.nlm.nih.gov/pubmed/33796771
http://dx.doi.org/10.1080/23802359.2021.1901618
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author Liu, Hongtao
Li, Bingshun
author_facet Liu, Hongtao
Li, Bingshun
author_sort Liu, Hongtao
collection PubMed
description The complete mitochondrial genome of convex reef crab Carpilius convexus was determined and characterized for the first time from the South China Sea. The whole mitogenome is 15,766 bp long and consists of 22 tRNA genes, 2 rRNA genes, 13 protein-coding genes (PCGs), and 1 control region. The nucleotide composition of the mitogenome is significantly biased (A, G, T, and C is 36.91%, 17.94%, 34.95%, and 10.19%, respectively) with A + T contents of 71.86%. All PCGs start with a normal initiation codon ATN and terminate with a standard stop codon except ND1 gene end with TTG. Five microsatellites are identified in C. convexus mitogenome sequences. The phylogenetic tree showed that C. convexus was first clustered with Carpilius maculatus, and strongly supports that the recognition of the Carpiliidae as a monophyletic family.
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spelling pubmed-79958582021-03-31 Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775) Liu, Hongtao Li, Bingshun Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of convex reef crab Carpilius convexus was determined and characterized for the first time from the South China Sea. The whole mitogenome is 15,766 bp long and consists of 22 tRNA genes, 2 rRNA genes, 13 protein-coding genes (PCGs), and 1 control region. The nucleotide composition of the mitogenome is significantly biased (A, G, T, and C is 36.91%, 17.94%, 34.95%, and 10.19%, respectively) with A + T contents of 71.86%. All PCGs start with a normal initiation codon ATN and terminate with a standard stop codon except ND1 gene end with TTG. Five microsatellites are identified in C. convexus mitogenome sequences. The phylogenetic tree showed that C. convexus was first clustered with Carpilius maculatus, and strongly supports that the recognition of the Carpiliidae as a monophyletic family. Taylor & Francis 2021-03-23 /pmc/articles/PMC7995858/ /pubmed/33796771 http://dx.doi.org/10.1080/23802359.2021.1901618 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Liu, Hongtao
Li, Bingshun
Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775)
title Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775)
title_full Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775)
title_fullStr Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775)
title_full_unstemmed Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775)
title_short Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775)
title_sort characterization of the complete mitochondrial genome of convex reef crab carpilius convexus (forskål, 1775)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995858/
https://www.ncbi.nlm.nih.gov/pubmed/33796771
http://dx.doi.org/10.1080/23802359.2021.1901618
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