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Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775)
The complete mitochondrial genome of convex reef crab Carpilius convexus was determined and characterized for the first time from the South China Sea. The whole mitogenome is 15,766 bp long and consists of 22 tRNA genes, 2 rRNA genes, 13 protein-coding genes (PCGs), and 1 control region. The nucleot...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995858/ https://www.ncbi.nlm.nih.gov/pubmed/33796771 http://dx.doi.org/10.1080/23802359.2021.1901618 |
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author | Liu, Hongtao Li, Bingshun |
author_facet | Liu, Hongtao Li, Bingshun |
author_sort | Liu, Hongtao |
collection | PubMed |
description | The complete mitochondrial genome of convex reef crab Carpilius convexus was determined and characterized for the first time from the South China Sea. The whole mitogenome is 15,766 bp long and consists of 22 tRNA genes, 2 rRNA genes, 13 protein-coding genes (PCGs), and 1 control region. The nucleotide composition of the mitogenome is significantly biased (A, G, T, and C is 36.91%, 17.94%, 34.95%, and 10.19%, respectively) with A + T contents of 71.86%. All PCGs start with a normal initiation codon ATN and terminate with a standard stop codon except ND1 gene end with TTG. Five microsatellites are identified in C. convexus mitogenome sequences. The phylogenetic tree showed that C. convexus was first clustered with Carpilius maculatus, and strongly supports that the recognition of the Carpiliidae as a monophyletic family. |
format | Online Article Text |
id | pubmed-7995858 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-79958582021-03-31 Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775) Liu, Hongtao Li, Bingshun Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of convex reef crab Carpilius convexus was determined and characterized for the first time from the South China Sea. The whole mitogenome is 15,766 bp long and consists of 22 tRNA genes, 2 rRNA genes, 13 protein-coding genes (PCGs), and 1 control region. The nucleotide composition of the mitogenome is significantly biased (A, G, T, and C is 36.91%, 17.94%, 34.95%, and 10.19%, respectively) with A + T contents of 71.86%. All PCGs start with a normal initiation codon ATN and terminate with a standard stop codon except ND1 gene end with TTG. Five microsatellites are identified in C. convexus mitogenome sequences. The phylogenetic tree showed that C. convexus was first clustered with Carpilius maculatus, and strongly supports that the recognition of the Carpiliidae as a monophyletic family. Taylor & Francis 2021-03-23 /pmc/articles/PMC7995858/ /pubmed/33796771 http://dx.doi.org/10.1080/23802359.2021.1901618 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Liu, Hongtao Li, Bingshun Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775) |
title | Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775) |
title_full | Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775) |
title_fullStr | Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775) |
title_full_unstemmed | Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775) |
title_short | Characterization of the complete mitochondrial genome of convex reef crab Carpilius convexus (Forskål, 1775) |
title_sort | characterization of the complete mitochondrial genome of convex reef crab carpilius convexus (forskål, 1775) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995858/ https://www.ncbi.nlm.nih.gov/pubmed/33796771 http://dx.doi.org/10.1080/23802359.2021.1901618 |
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