The complete chloroplast genome of Salsola abrotanoides (Chenopodiaceae), a desert halophyte shrub in China

Salsola abrotanoides, one of the dominant plant species of desert vegetation, adapts well to the arid, saline, and alkaline environment in the Qinghai–Tibetan Plateau. Here, we reported the complete chloroplast sequence and characters of S. abrotanoides based on the Illumina NovaSeq Platform. The ch...

Descripción completa

Detalles Bibliográficos
Autores principales: Li, Xinyin, Zhang, Qianqian, Duo, Jiecuo, Yang, Yuanwu, Ju, Xia, Duan, Ruijun, Xiong, Huiyan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995892/
https://www.ncbi.nlm.nih.gov/pubmed/33796773
http://dx.doi.org/10.1080/23802359.2021.1903353
_version_ 1783670002744819712
author Li, Xinyin
Zhang, Qianqian
Duo, Jiecuo
Yang, Yuanwu
Ju, Xia
Duan, Ruijun
Xiong, Huiyan
author_facet Li, Xinyin
Zhang, Qianqian
Duo, Jiecuo
Yang, Yuanwu
Ju, Xia
Duan, Ruijun
Xiong, Huiyan
author_sort Li, Xinyin
collection PubMed
description Salsola abrotanoides, one of the dominant plant species of desert vegetation, adapts well to the arid, saline, and alkaline environment in the Qinghai–Tibetan Plateau. Here, we reported the complete chloroplast sequence and characters of S. abrotanoides based on the Illumina NovaSeq Platform. The chloroplast genome is 151,622 bp in length, containing a pair of inverted repeated (IR) regions of 23,701 bp, a large single copy (LSC) region of 84,658 bp, and a small single copy (SSC) region of 19,562 bp. And the chloroplast genome sequence encodes 130 genes totally, including 85 mRNA genes, 37 tRNA genes, and 8 rRNA genes. S. abrotanoides is the first species of Genus Salsola and the chloroplast sequence will provide a valuable resource for the phylogenetic studies of Chenopodiaceae.
format Online
Article
Text
id pubmed-7995892
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-79958922021-03-31 The complete chloroplast genome of Salsola abrotanoides (Chenopodiaceae), a desert halophyte shrub in China Li, Xinyin Zhang, Qianqian Duo, Jiecuo Yang, Yuanwu Ju, Xia Duan, Ruijun Xiong, Huiyan Mitochondrial DNA B Resour Mitogenome Announcement Salsola abrotanoides, one of the dominant plant species of desert vegetation, adapts well to the arid, saline, and alkaline environment in the Qinghai–Tibetan Plateau. Here, we reported the complete chloroplast sequence and characters of S. abrotanoides based on the Illumina NovaSeq Platform. The chloroplast genome is 151,622 bp in length, containing a pair of inverted repeated (IR) regions of 23,701 bp, a large single copy (LSC) region of 84,658 bp, and a small single copy (SSC) region of 19,562 bp. And the chloroplast genome sequence encodes 130 genes totally, including 85 mRNA genes, 37 tRNA genes, and 8 rRNA genes. S. abrotanoides is the first species of Genus Salsola and the chloroplast sequence will provide a valuable resource for the phylogenetic studies of Chenopodiaceae. Taylor & Francis 2021-03-24 /pmc/articles/PMC7995892/ /pubmed/33796773 http://dx.doi.org/10.1080/23802359.2021.1903353 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Li, Xinyin
Zhang, Qianqian
Duo, Jiecuo
Yang, Yuanwu
Ju, Xia
Duan, Ruijun
Xiong, Huiyan
The complete chloroplast genome of Salsola abrotanoides (Chenopodiaceae), a desert halophyte shrub in China
title The complete chloroplast genome of Salsola abrotanoides (Chenopodiaceae), a desert halophyte shrub in China
title_full The complete chloroplast genome of Salsola abrotanoides (Chenopodiaceae), a desert halophyte shrub in China
title_fullStr The complete chloroplast genome of Salsola abrotanoides (Chenopodiaceae), a desert halophyte shrub in China
title_full_unstemmed The complete chloroplast genome of Salsola abrotanoides (Chenopodiaceae), a desert halophyte shrub in China
title_short The complete chloroplast genome of Salsola abrotanoides (Chenopodiaceae), a desert halophyte shrub in China
title_sort complete chloroplast genome of salsola abrotanoides (chenopodiaceae), a desert halophyte shrub in china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995892/
https://www.ncbi.nlm.nih.gov/pubmed/33796773
http://dx.doi.org/10.1080/23802359.2021.1903353
work_keys_str_mv AT lixinyin thecompletechloroplastgenomeofsalsolaabrotanoideschenopodiaceaeadeserthalophyteshrubinchina
AT zhangqianqian thecompletechloroplastgenomeofsalsolaabrotanoideschenopodiaceaeadeserthalophyteshrubinchina
AT duojiecuo thecompletechloroplastgenomeofsalsolaabrotanoideschenopodiaceaeadeserthalophyteshrubinchina
AT yangyuanwu thecompletechloroplastgenomeofsalsolaabrotanoideschenopodiaceaeadeserthalophyteshrubinchina
AT juxia thecompletechloroplastgenomeofsalsolaabrotanoideschenopodiaceaeadeserthalophyteshrubinchina
AT duanruijun thecompletechloroplastgenomeofsalsolaabrotanoideschenopodiaceaeadeserthalophyteshrubinchina
AT xionghuiyan thecompletechloroplastgenomeofsalsolaabrotanoideschenopodiaceaeadeserthalophyteshrubinchina
AT lixinyin completechloroplastgenomeofsalsolaabrotanoideschenopodiaceaeadeserthalophyteshrubinchina
AT zhangqianqian completechloroplastgenomeofsalsolaabrotanoideschenopodiaceaeadeserthalophyteshrubinchina
AT duojiecuo completechloroplastgenomeofsalsolaabrotanoideschenopodiaceaeadeserthalophyteshrubinchina
AT yangyuanwu completechloroplastgenomeofsalsolaabrotanoideschenopodiaceaeadeserthalophyteshrubinchina
AT juxia completechloroplastgenomeofsalsolaabrotanoideschenopodiaceaeadeserthalophyteshrubinchina
AT duanruijun completechloroplastgenomeofsalsolaabrotanoideschenopodiaceaeadeserthalophyteshrubinchina
AT xionghuiyan completechloroplastgenomeofsalsolaabrotanoideschenopodiaceaeadeserthalophyteshrubinchina

Ejemplares similares