Characterization and phylogenetic analysis of the complete plastome of Ipomoea aquatica (Convolvulaceae), an edible vegetable

Ipomoea aquatica, commonly known as water spinach, is an edible annual vegetable in the genus Ipomoea,. In this study, the complete plastome of Ipomoea aquatica was determined using the Illumina sequencing platform. The plastome size was 162,663 bp. It consists of four regions, including a large sin...

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Autores principales: Wang, Qing-Jun, Wang, Rong, Zhang, Luo-yan, Zhang, Xue-Jie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995903/
https://www.ncbi.nlm.nih.gov/pubmed/33796711
http://dx.doi.org/10.1080/23802359.2021.1891985
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author Wang, Qing-Jun
Wang, Rong
Zhang, Luo-yan
Zhang, Xue-Jie
author_facet Wang, Qing-Jun
Wang, Rong
Zhang, Luo-yan
Zhang, Xue-Jie
author_sort Wang, Qing-Jun
collection PubMed
description Ipomoea aquatica, commonly known as water spinach, is an edible annual vegetable in the genus Ipomoea,. In this study, the complete plastome of Ipomoea aquatica was determined using the Illumina sequencing platform. The plastome size was 162,663 bp. It consists of four regions, including a large single-copy region (88,166 bp), a small single-copy region (12,069 bp), and a pair of inverted repeat regions (31,214 bp). This plastome encodes 114 unique genes, including 80 protein-coding genes (PCGs), 30 transfer RNA genes (tRNAs), and 4 ribosomal RNA genes (rRNAs). The GC content was 39.1%. Phylogenomic analysis based on 19 complete plastomes revealed that I. aquatica was closely related to I. diamantinensis.
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spelling pubmed-79959032021-03-31 Characterization and phylogenetic analysis of the complete plastome of Ipomoea aquatica (Convolvulaceae), an edible vegetable Wang, Qing-Jun Wang, Rong Zhang, Luo-yan Zhang, Xue-Jie Mitochondrial DNA B Resour Mitogenome Announcement Ipomoea aquatica, commonly known as water spinach, is an edible annual vegetable in the genus Ipomoea,. In this study, the complete plastome of Ipomoea aquatica was determined using the Illumina sequencing platform. The plastome size was 162,663 bp. It consists of four regions, including a large single-copy region (88,166 bp), a small single-copy region (12,069 bp), and a pair of inverted repeat regions (31,214 bp). This plastome encodes 114 unique genes, including 80 protein-coding genes (PCGs), 30 transfer RNA genes (tRNAs), and 4 ribosomal RNA genes (rRNAs). The GC content was 39.1%. Phylogenomic analysis based on 19 complete plastomes revealed that I. aquatica was closely related to I. diamantinensis. Taylor & Francis 2021-03-18 /pmc/articles/PMC7995903/ /pubmed/33796711 http://dx.doi.org/10.1080/23802359.2021.1891985 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wang, Qing-Jun
Wang, Rong
Zhang, Luo-yan
Zhang, Xue-Jie
Characterization and phylogenetic analysis of the complete plastome of Ipomoea aquatica (Convolvulaceae), an edible vegetable
title Characterization and phylogenetic analysis of the complete plastome of Ipomoea aquatica (Convolvulaceae), an edible vegetable
title_full Characterization and phylogenetic analysis of the complete plastome of Ipomoea aquatica (Convolvulaceae), an edible vegetable
title_fullStr Characterization and phylogenetic analysis of the complete plastome of Ipomoea aquatica (Convolvulaceae), an edible vegetable
title_full_unstemmed Characterization and phylogenetic analysis of the complete plastome of Ipomoea aquatica (Convolvulaceae), an edible vegetable
title_short Characterization and phylogenetic analysis of the complete plastome of Ipomoea aquatica (Convolvulaceae), an edible vegetable
title_sort characterization and phylogenetic analysis of the complete plastome of ipomoea aquatica (convolvulaceae), an edible vegetable
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995903/
https://www.ncbi.nlm.nih.gov/pubmed/33796711
http://dx.doi.org/10.1080/23802359.2021.1891985
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