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The complete chloroplast genome sequence of Nicotiana debneyi (Solanaceae)

In present study, we report the complete chloroplast genome of Nicotiana debneyi, a species endemic to eastern coast of Australia. The total genome size of N.debneyi is 156,073 bp in length, containing a large single-copy region of 86,672 bp, a small single-copy region of 18,581 bp, and two inverted...

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Autores principales: Zeng, Jianmin, Huang, Changjun, Liu, Yong, Yuan, Cheng, Yu, Haiqin, Song, Biqing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995905/
https://www.ncbi.nlm.nih.gov/pubmed/33796732
http://dx.doi.org/10.1080/23802359.2021.1899074
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author Zeng, Jianmin
Huang, Changjun
Liu, Yong
Yuan, Cheng
Yu, Haiqin
Song, Biqing
author_facet Zeng, Jianmin
Huang, Changjun
Liu, Yong
Yuan, Cheng
Yu, Haiqin
Song, Biqing
author_sort Zeng, Jianmin
collection PubMed
description In present study, we report the complete chloroplast genome of Nicotiana debneyi, a species endemic to eastern coast of Australia. The total genome size of N.debneyi is 156,073 bp in length, containing a large single-copy region of 86,672 bp, a small single-copy region of 18,581 bp, and two inverted repeat regions of 25,410 bp. The all GC content of N.debneyi chloroplast genome is 38.4%. It encodes a total of 129 unique genes, including 84 protein-coding genes, 37 tRNA genes, and eight rRNA genes, of which seven tRNA, four rRNA and seven protein-coding genes are duplicated in the IR. Sixteen genes contain a single intron, and only two genes have two introns. Phylogenetic analysis results strongly supported that N.debneyi was closely related to Nicotiana sylvestris and Nicotiana tabacum.
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spelling pubmed-79959052021-03-31 The complete chloroplast genome sequence of Nicotiana debneyi (Solanaceae) Zeng, Jianmin Huang, Changjun Liu, Yong Yuan, Cheng Yu, Haiqin Song, Biqing Mitochondrial DNA B Resour Mitogenome Announcement In present study, we report the complete chloroplast genome of Nicotiana debneyi, a species endemic to eastern coast of Australia. The total genome size of N.debneyi is 156,073 bp in length, containing a large single-copy region of 86,672 bp, a small single-copy region of 18,581 bp, and two inverted repeat regions of 25,410 bp. The all GC content of N.debneyi chloroplast genome is 38.4%. It encodes a total of 129 unique genes, including 84 protein-coding genes, 37 tRNA genes, and eight rRNA genes, of which seven tRNA, four rRNA and seven protein-coding genes are duplicated in the IR. Sixteen genes contain a single intron, and only two genes have two introns. Phylogenetic analysis results strongly supported that N.debneyi was closely related to Nicotiana sylvestris and Nicotiana tabacum. Taylor & Francis 2021-03-19 /pmc/articles/PMC7995905/ /pubmed/33796732 http://dx.doi.org/10.1080/23802359.2021.1899074 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zeng, Jianmin
Huang, Changjun
Liu, Yong
Yuan, Cheng
Yu, Haiqin
Song, Biqing
The complete chloroplast genome sequence of Nicotiana debneyi (Solanaceae)
title The complete chloroplast genome sequence of Nicotiana debneyi (Solanaceae)
title_full The complete chloroplast genome sequence of Nicotiana debneyi (Solanaceae)
title_fullStr The complete chloroplast genome sequence of Nicotiana debneyi (Solanaceae)
title_full_unstemmed The complete chloroplast genome sequence of Nicotiana debneyi (Solanaceae)
title_short The complete chloroplast genome sequence of Nicotiana debneyi (Solanaceae)
title_sort complete chloroplast genome sequence of nicotiana debneyi (solanaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7995905/
https://www.ncbi.nlm.nih.gov/pubmed/33796732
http://dx.doi.org/10.1080/23802359.2021.1899074
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