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Deep Neural Networks Can Predict New-Onset Atrial Fibrillation From the 12-Lead ECG and Help Identify Those at Risk of Atrial Fibrillation–Related Stroke
Atrial fibrillation (AF) is associated with substantial morbidity, especially when it goes undetected. If new-onset AF could be predicted, targeted screening could be used to find it early. We hypothesized that a deep neural network could predict new-onset AF from the resting 12-lead ECG and that th...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Lippincott Williams & Wilkins
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7996054/ https://www.ncbi.nlm.nih.gov/pubmed/33588584 http://dx.doi.org/10.1161/CIRCULATIONAHA.120.047829 |
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author | Raghunath, Sushravya Pfeifer, John M. Ulloa-Cerna, Alvaro E. Nemani, Arun Carbonati, Tanner Jing, Linyuan vanMaanen, David P. Hartzel, Dustin N. Ruhl, Jeffery A. Lagerman, Braxton F. Rocha, Daniel B. Stoudt, Nathan J. Schneider, Gargi Johnson, Kipp W. Zimmerman, Noah Leader, Joseph B. Kirchner, H. Lester Griessenauer, Christoph J. Hafez, Ashraf Good, Christopher W. Fornwalt, Brandon K. Haggerty, Christopher M. |
author_facet | Raghunath, Sushravya Pfeifer, John M. Ulloa-Cerna, Alvaro E. Nemani, Arun Carbonati, Tanner Jing, Linyuan vanMaanen, David P. Hartzel, Dustin N. Ruhl, Jeffery A. Lagerman, Braxton F. Rocha, Daniel B. Stoudt, Nathan J. Schneider, Gargi Johnson, Kipp W. Zimmerman, Noah Leader, Joseph B. Kirchner, H. Lester Griessenauer, Christoph J. Hafez, Ashraf Good, Christopher W. Fornwalt, Brandon K. Haggerty, Christopher M. |
author_sort | Raghunath, Sushravya |
collection | PubMed |
description | Atrial fibrillation (AF) is associated with substantial morbidity, especially when it goes undetected. If new-onset AF could be predicted, targeted screening could be used to find it early. We hypothesized that a deep neural network could predict new-onset AF from the resting 12-lead ECG and that this prediction may help identify those at risk of AF-related stroke. METHODS: We used 1.6 M resting 12-lead digital ECG traces from 430 000 patients collected from 1984 to 2019. Deep neural networks were trained to predict new-onset AF (within 1 year) in patients without a history of AF. Performance was evaluated using areas under the receiver operating characteristic curve and precision-recall curve. We performed an incidence-free survival analysis for a period of 30 years following the ECG stratified by model predictions. To simulate real-world deployment, we trained a separate model using all ECGs before 2010 and evaluated model performance on a test set of ECGs from 2010 through 2014 that were linked to our stroke registry. We identified the patients at risk for AF-related stroke among those predicted to be high risk for AF by the model at different prediction thresholds. RESULTS: The area under the receiver operating characteristic curve and area under the precision-recall curve were 0.85 and 0.22, respectively, for predicting new-onset AF within 1 year of an ECG. The hazard ratio for the predicted high- versus low-risk groups over a 30-year span was 7.2 (95% CI, 6.9–7.6). In a simulated deployment scenario, the model predicted new-onset AF at 1 year with a sensitivity of 69% and specificity of 81%. The number needed to screen to find 1 new case of AF was 9. This model predicted patients at high risk for new-onset AF in 62% of all patients who experienced an AF-related stroke within 3 years of the index ECG. CONCLUSIONS: Deep learning can predict new-onset AF from the 12-lead ECG in patients with no previous history of AF. This prediction may help identify patients at risk for AF-related strokes. |
format | Online Article Text |
id | pubmed-7996054 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Lippincott Williams & Wilkins |
record_format | MEDLINE/PubMed |
spelling | pubmed-79960542021-03-26 Deep Neural Networks Can Predict New-Onset Atrial Fibrillation From the 12-Lead ECG and Help Identify Those at Risk of Atrial Fibrillation–Related Stroke Raghunath, Sushravya Pfeifer, John M. Ulloa-Cerna, Alvaro E. Nemani, Arun Carbonati, Tanner Jing, Linyuan vanMaanen, David P. Hartzel, Dustin N. Ruhl, Jeffery A. Lagerman, Braxton F. Rocha, Daniel B. Stoudt, Nathan J. Schneider, Gargi Johnson, Kipp W. Zimmerman, Noah Leader, Joseph B. Kirchner, H. Lester Griessenauer, Christoph J. Hafez, Ashraf Good, Christopher W. Fornwalt, Brandon K. Haggerty, Christopher M. Circulation Original Research Articles Atrial fibrillation (AF) is associated with substantial morbidity, especially when it goes undetected. If new-onset AF could be predicted, targeted screening could be used to find it early. We hypothesized that a deep neural network could predict new-onset AF from the resting 12-lead ECG and that this prediction may help identify those at risk of AF-related stroke. METHODS: We used 1.6 M resting 12-lead digital ECG traces from 430 000 patients collected from 1984 to 2019. Deep neural networks were trained to predict new-onset AF (within 1 year) in patients without a history of AF. Performance was evaluated using areas under the receiver operating characteristic curve and precision-recall curve. We performed an incidence-free survival analysis for a period of 30 years following the ECG stratified by model predictions. To simulate real-world deployment, we trained a separate model using all ECGs before 2010 and evaluated model performance on a test set of ECGs from 2010 through 2014 that were linked to our stroke registry. We identified the patients at risk for AF-related stroke among those predicted to be high risk for AF by the model at different prediction thresholds. RESULTS: The area under the receiver operating characteristic curve and area under the precision-recall curve were 0.85 and 0.22, respectively, for predicting new-onset AF within 1 year of an ECG. The hazard ratio for the predicted high- versus low-risk groups over a 30-year span was 7.2 (95% CI, 6.9–7.6). In a simulated deployment scenario, the model predicted new-onset AF at 1 year with a sensitivity of 69% and specificity of 81%. The number needed to screen to find 1 new case of AF was 9. This model predicted patients at high risk for new-onset AF in 62% of all patients who experienced an AF-related stroke within 3 years of the index ECG. CONCLUSIONS: Deep learning can predict new-onset AF from the 12-lead ECG in patients with no previous history of AF. This prediction may help identify patients at risk for AF-related strokes. Lippincott Williams & Wilkins 2021-02-16 2021-03-30 /pmc/articles/PMC7996054/ /pubmed/33588584 http://dx.doi.org/10.1161/CIRCULATIONAHA.120.047829 Text en © 2021 The Authors. Circulation is published on behalf of the American Heart Association, Inc., by Wolters Kluwer Health, Inc. This is an open access article under the terms of the Creative Commons Attribution Non-Commercial-NoDerivs (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use, distribution, and reproduction in any medium, provided that the original work is properly cited, the use is noncommercial, and no modifications or adaptations are made. This article is made available via the PMC Open Access Subset for unrestricted re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the COVID-19 pandemic or until permissions are revoked in writing. Upon expiration of these permissions, PMC is granted a perpetual license to make this article available via PMC and Europe PMC, consistent with existing copyright protections. |
spellingShingle | Original Research Articles Raghunath, Sushravya Pfeifer, John M. Ulloa-Cerna, Alvaro E. Nemani, Arun Carbonati, Tanner Jing, Linyuan vanMaanen, David P. Hartzel, Dustin N. Ruhl, Jeffery A. Lagerman, Braxton F. Rocha, Daniel B. Stoudt, Nathan J. Schneider, Gargi Johnson, Kipp W. Zimmerman, Noah Leader, Joseph B. Kirchner, H. Lester Griessenauer, Christoph J. Hafez, Ashraf Good, Christopher W. Fornwalt, Brandon K. Haggerty, Christopher M. Deep Neural Networks Can Predict New-Onset Atrial Fibrillation From the 12-Lead ECG and Help Identify Those at Risk of Atrial Fibrillation–Related Stroke |
title | Deep Neural Networks Can Predict New-Onset Atrial Fibrillation From the 12-Lead ECG and Help Identify Those at Risk of Atrial Fibrillation–Related Stroke |
title_full | Deep Neural Networks Can Predict New-Onset Atrial Fibrillation From the 12-Lead ECG and Help Identify Those at Risk of Atrial Fibrillation–Related Stroke |
title_fullStr | Deep Neural Networks Can Predict New-Onset Atrial Fibrillation From the 12-Lead ECG and Help Identify Those at Risk of Atrial Fibrillation–Related Stroke |
title_full_unstemmed | Deep Neural Networks Can Predict New-Onset Atrial Fibrillation From the 12-Lead ECG and Help Identify Those at Risk of Atrial Fibrillation–Related Stroke |
title_short | Deep Neural Networks Can Predict New-Onset Atrial Fibrillation From the 12-Lead ECG and Help Identify Those at Risk of Atrial Fibrillation–Related Stroke |
title_sort | deep neural networks can predict new-onset atrial fibrillation from the 12-lead ecg and help identify those at risk of atrial fibrillation–related stroke |
topic | Original Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7996054/ https://www.ncbi.nlm.nih.gov/pubmed/33588584 http://dx.doi.org/10.1161/CIRCULATIONAHA.120.047829 |
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