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TBDBT: A TB DataBase Template for collection of harmonized TB clinical research data in REDCap, facilitating data standardisation for inter-study comparison and meta-analyses

Clinical tuberculosis research, both within research groups and across research ecosystems, is often undertaken in isolation using bespoke data collection platforms and applying differing data conventions. This failure to harmonise clinical phenotype data or apply standardised data collection and st...

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Autores principales: Allie, Taryn, Jackson, Amanda, Ambler, Jon, Johnston, Katherine, Du Bruyn, Elsa, Schultz, Charlotte, Boloko, Linda, Wasserman, Sean, Davis, Angharad, Meintjes, Graeme, Wilkinson, Robert J., Tiffin, Nicki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7996972/
https://www.ncbi.nlm.nih.gov/pubmed/33770143
http://dx.doi.org/10.1371/journal.pone.0249165
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author Allie, Taryn
Jackson, Amanda
Ambler, Jon
Johnston, Katherine
Du Bruyn, Elsa
Schultz, Charlotte
Boloko, Linda
Wasserman, Sean
Davis, Angharad
Meintjes, Graeme
Wilkinson, Robert J.
Tiffin, Nicki
author_facet Allie, Taryn
Jackson, Amanda
Ambler, Jon
Johnston, Katherine
Du Bruyn, Elsa
Schultz, Charlotte
Boloko, Linda
Wasserman, Sean
Davis, Angharad
Meintjes, Graeme
Wilkinson, Robert J.
Tiffin, Nicki
author_sort Allie, Taryn
collection PubMed
description Clinical tuberculosis research, both within research groups and across research ecosystems, is often undertaken in isolation using bespoke data collection platforms and applying differing data conventions. This failure to harmonise clinical phenotype data or apply standardised data collection and storage standards in turn limits the opportunity to undertake meta-analyses using data generated across multiple research projects for the same research domain. We have developed the Tuberculosis DataBase Template (TBDBT), a template for the well-supported, free and commonly deployed clinical databasing platform, REDCap. This template can be used to set up a new tuberculosis research database with a built-in set of standardised data conventions, to ensure standardised data capture across research projects and programs. A modular design enables researchers to implement only the modules of the database template that are appropriate for their particular study. The template includes core modules for informed consent data, participant demographics, clinical symptoms and presentation, diagnostic imaging and laboratory tests. Optional modules have been designed for visit scheduling and calendar functionality, clinical trial randomisation, study logistics and operations, and pharmacokinetic data. Additional fields can be added as needed. This REDCap template can facilitate collection of high-quality data for tuberculosis research, providing a tool to ensure better data harmonisation, analysis and meta-analysis.
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spelling pubmed-79969722021-04-05 TBDBT: A TB DataBase Template for collection of harmonized TB clinical research data in REDCap, facilitating data standardisation for inter-study comparison and meta-analyses Allie, Taryn Jackson, Amanda Ambler, Jon Johnston, Katherine Du Bruyn, Elsa Schultz, Charlotte Boloko, Linda Wasserman, Sean Davis, Angharad Meintjes, Graeme Wilkinson, Robert J. Tiffin, Nicki PLoS One Research Article Clinical tuberculosis research, both within research groups and across research ecosystems, is often undertaken in isolation using bespoke data collection platforms and applying differing data conventions. This failure to harmonise clinical phenotype data or apply standardised data collection and storage standards in turn limits the opportunity to undertake meta-analyses using data generated across multiple research projects for the same research domain. We have developed the Tuberculosis DataBase Template (TBDBT), a template for the well-supported, free and commonly deployed clinical databasing platform, REDCap. This template can be used to set up a new tuberculosis research database with a built-in set of standardised data conventions, to ensure standardised data capture across research projects and programs. A modular design enables researchers to implement only the modules of the database template that are appropriate for their particular study. The template includes core modules for informed consent data, participant demographics, clinical symptoms and presentation, diagnostic imaging and laboratory tests. Optional modules have been designed for visit scheduling and calendar functionality, clinical trial randomisation, study logistics and operations, and pharmacokinetic data. Additional fields can be added as needed. This REDCap template can facilitate collection of high-quality data for tuberculosis research, providing a tool to ensure better data harmonisation, analysis and meta-analysis. Public Library of Science 2021-03-26 /pmc/articles/PMC7996972/ /pubmed/33770143 http://dx.doi.org/10.1371/journal.pone.0249165 Text en © 2021 Allie et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Allie, Taryn
Jackson, Amanda
Ambler, Jon
Johnston, Katherine
Du Bruyn, Elsa
Schultz, Charlotte
Boloko, Linda
Wasserman, Sean
Davis, Angharad
Meintjes, Graeme
Wilkinson, Robert J.
Tiffin, Nicki
TBDBT: A TB DataBase Template for collection of harmonized TB clinical research data in REDCap, facilitating data standardisation for inter-study comparison and meta-analyses
title TBDBT: A TB DataBase Template for collection of harmonized TB clinical research data in REDCap, facilitating data standardisation for inter-study comparison and meta-analyses
title_full TBDBT: A TB DataBase Template for collection of harmonized TB clinical research data in REDCap, facilitating data standardisation for inter-study comparison and meta-analyses
title_fullStr TBDBT: A TB DataBase Template for collection of harmonized TB clinical research data in REDCap, facilitating data standardisation for inter-study comparison and meta-analyses
title_full_unstemmed TBDBT: A TB DataBase Template for collection of harmonized TB clinical research data in REDCap, facilitating data standardisation for inter-study comparison and meta-analyses
title_short TBDBT: A TB DataBase Template for collection of harmonized TB clinical research data in REDCap, facilitating data standardisation for inter-study comparison and meta-analyses
title_sort tbdbt: a tb database template for collection of harmonized tb clinical research data in redcap, facilitating data standardisation for inter-study comparison and meta-analyses
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7996972/
https://www.ncbi.nlm.nih.gov/pubmed/33770143
http://dx.doi.org/10.1371/journal.pone.0249165
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