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From Reductionism to Reintegration: Solving society’s most pressing problems requires building bridges between data types across the life sciences
Decades of reductionist approaches in biology have achieved spectacular progress, but the proliferation of subdisciplines, each with its own technical and social practices regarding data, impedes the growth of the multidisciplinary and interdisciplinary approaches now needed to address pressing soci...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7997011/ https://www.ncbi.nlm.nih.gov/pubmed/33770077 http://dx.doi.org/10.1371/journal.pbio.3001129 |
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author | Thessen, Anne E. Bogdan, Paul Patterson, David J. Casey, Theresa M. Hinojo-Hinojo, César de Lange, Orlando Haendel, Melissa A. |
author_facet | Thessen, Anne E. Bogdan, Paul Patterson, David J. Casey, Theresa M. Hinojo-Hinojo, César de Lange, Orlando Haendel, Melissa A. |
author_sort | Thessen, Anne E. |
collection | PubMed |
description | Decades of reductionist approaches in biology have achieved spectacular progress, but the proliferation of subdisciplines, each with its own technical and social practices regarding data, impedes the growth of the multidisciplinary and interdisciplinary approaches now needed to address pressing societal challenges. Data integration is key to a reintegrated biology able to address global issues such as climate change, biodiversity loss, and sustainable ecosystem management. We identify major challenges to data integration and present a vision for a “Data as a Service”-oriented architecture to promote reuse of data for discovery. The proposed architecture includes standards development, new tools and services, and strategies for career-development and sustainability. |
format | Online Article Text |
id | pubmed-7997011 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-79970112021-04-06 From Reductionism to Reintegration: Solving society’s most pressing problems requires building bridges between data types across the life sciences Thessen, Anne E. Bogdan, Paul Patterson, David J. Casey, Theresa M. Hinojo-Hinojo, César de Lange, Orlando Haendel, Melissa A. PLoS Biol Essay Decades of reductionist approaches in biology have achieved spectacular progress, but the proliferation of subdisciplines, each with its own technical and social practices regarding data, impedes the growth of the multidisciplinary and interdisciplinary approaches now needed to address pressing societal challenges. Data integration is key to a reintegrated biology able to address global issues such as climate change, biodiversity loss, and sustainable ecosystem management. We identify major challenges to data integration and present a vision for a “Data as a Service”-oriented architecture to promote reuse of data for discovery. The proposed architecture includes standards development, new tools and services, and strategies for career-development and sustainability. Public Library of Science 2021-03-26 /pmc/articles/PMC7997011/ /pubmed/33770077 http://dx.doi.org/10.1371/journal.pbio.3001129 Text en © 2021 Thessen et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Essay Thessen, Anne E. Bogdan, Paul Patterson, David J. Casey, Theresa M. Hinojo-Hinojo, César de Lange, Orlando Haendel, Melissa A. From Reductionism to Reintegration: Solving society’s most pressing problems requires building bridges between data types across the life sciences |
title | From Reductionism to Reintegration: Solving society’s most pressing problems requires building bridges between data types across the life sciences |
title_full | From Reductionism to Reintegration: Solving society’s most pressing problems requires building bridges between data types across the life sciences |
title_fullStr | From Reductionism to Reintegration: Solving society’s most pressing problems requires building bridges between data types across the life sciences |
title_full_unstemmed | From Reductionism to Reintegration: Solving society’s most pressing problems requires building bridges between data types across the life sciences |
title_short | From Reductionism to Reintegration: Solving society’s most pressing problems requires building bridges between data types across the life sciences |
title_sort | from reductionism to reintegration: solving society’s most pressing problems requires building bridges between data types across the life sciences |
topic | Essay |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7997011/ https://www.ncbi.nlm.nih.gov/pubmed/33770077 http://dx.doi.org/10.1371/journal.pbio.3001129 |
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