Cargando…

Numerical simulation of time-resolved 3D phase-contrast magnetic resonance imaging

A numerical approach is presented to efficiently simulate time-resolved 3D phase-contrast Magnetic resonance Imaging (or 4D Flow MRI) acquisitions under realistic flow conditions. The Navier-Stokes and Bloch equations are simultaneously solved with an Eulerian-Lagrangian formalism. A semi-analytic s...

Descripción completa

Detalles Bibliográficos
Autores principales: Puiseux, Thomas, Sewonu, Anou, Moreno, Ramiro, Mendez, Simon, Nicoud, Franck
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7997039/
https://www.ncbi.nlm.nih.gov/pubmed/33770130
http://dx.doi.org/10.1371/journal.pone.0248816
_version_ 1783670237187538944
author Puiseux, Thomas
Sewonu, Anou
Moreno, Ramiro
Mendez, Simon
Nicoud, Franck
author_facet Puiseux, Thomas
Sewonu, Anou
Moreno, Ramiro
Mendez, Simon
Nicoud, Franck
author_sort Puiseux, Thomas
collection PubMed
description A numerical approach is presented to efficiently simulate time-resolved 3D phase-contrast Magnetic resonance Imaging (or 4D Flow MRI) acquisitions under realistic flow conditions. The Navier-Stokes and Bloch equations are simultaneously solved with an Eulerian-Lagrangian formalism. A semi-analytic solution for the Bloch equations as well as a periodic particle seeding strategy are developed to reduce the computational cost. The velocity reconstruction pipeline is first validated by considering a Poiseuille flow configuration. The 4D Flow MRI simulation procedure is then applied to the flow within an in vitro flow phantom typical of the cardiovascular system. The simulated MR velocity images compare favorably to both the flow computed by solving the Navier-Stokes equations and experimental 4D Flow MRI measurements. A practical application is finally presented in which the MRI simulation framework is used to identify the origins of the MRI measurement errors.
format Online
Article
Text
id pubmed-7997039
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-79970392021-04-06 Numerical simulation of time-resolved 3D phase-contrast magnetic resonance imaging Puiseux, Thomas Sewonu, Anou Moreno, Ramiro Mendez, Simon Nicoud, Franck PLoS One Research Article A numerical approach is presented to efficiently simulate time-resolved 3D phase-contrast Magnetic resonance Imaging (or 4D Flow MRI) acquisitions under realistic flow conditions. The Navier-Stokes and Bloch equations are simultaneously solved with an Eulerian-Lagrangian formalism. A semi-analytic solution for the Bloch equations as well as a periodic particle seeding strategy are developed to reduce the computational cost. The velocity reconstruction pipeline is first validated by considering a Poiseuille flow configuration. The 4D Flow MRI simulation procedure is then applied to the flow within an in vitro flow phantom typical of the cardiovascular system. The simulated MR velocity images compare favorably to both the flow computed by solving the Navier-Stokes equations and experimental 4D Flow MRI measurements. A practical application is finally presented in which the MRI simulation framework is used to identify the origins of the MRI measurement errors. Public Library of Science 2021-03-26 /pmc/articles/PMC7997039/ /pubmed/33770130 http://dx.doi.org/10.1371/journal.pone.0248816 Text en © 2021 Puiseux et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Puiseux, Thomas
Sewonu, Anou
Moreno, Ramiro
Mendez, Simon
Nicoud, Franck
Numerical simulation of time-resolved 3D phase-contrast magnetic resonance imaging
title Numerical simulation of time-resolved 3D phase-contrast magnetic resonance imaging
title_full Numerical simulation of time-resolved 3D phase-contrast magnetic resonance imaging
title_fullStr Numerical simulation of time-resolved 3D phase-contrast magnetic resonance imaging
title_full_unstemmed Numerical simulation of time-resolved 3D phase-contrast magnetic resonance imaging
title_short Numerical simulation of time-resolved 3D phase-contrast magnetic resonance imaging
title_sort numerical simulation of time-resolved 3d phase-contrast magnetic resonance imaging
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7997039/
https://www.ncbi.nlm.nih.gov/pubmed/33770130
http://dx.doi.org/10.1371/journal.pone.0248816
work_keys_str_mv AT puiseuxthomas numericalsimulationoftimeresolved3dphasecontrastmagneticresonanceimaging
AT sewonuanou numericalsimulationoftimeresolved3dphasecontrastmagneticresonanceimaging
AT morenoramiro numericalsimulationoftimeresolved3dphasecontrastmagneticresonanceimaging
AT mendezsimon numericalsimulationoftimeresolved3dphasecontrastmagneticresonanceimaging
AT nicoudfranck numericalsimulationoftimeresolved3dphasecontrastmagneticresonanceimaging