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Numerical simulation of time-resolved 3D phase-contrast magnetic resonance imaging
A numerical approach is presented to efficiently simulate time-resolved 3D phase-contrast Magnetic resonance Imaging (or 4D Flow MRI) acquisitions under realistic flow conditions. The Navier-Stokes and Bloch equations are simultaneously solved with an Eulerian-Lagrangian formalism. A semi-analytic s...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7997039/ https://www.ncbi.nlm.nih.gov/pubmed/33770130 http://dx.doi.org/10.1371/journal.pone.0248816 |
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author | Puiseux, Thomas Sewonu, Anou Moreno, Ramiro Mendez, Simon Nicoud, Franck |
author_facet | Puiseux, Thomas Sewonu, Anou Moreno, Ramiro Mendez, Simon Nicoud, Franck |
author_sort | Puiseux, Thomas |
collection | PubMed |
description | A numerical approach is presented to efficiently simulate time-resolved 3D phase-contrast Magnetic resonance Imaging (or 4D Flow MRI) acquisitions under realistic flow conditions. The Navier-Stokes and Bloch equations are simultaneously solved with an Eulerian-Lagrangian formalism. A semi-analytic solution for the Bloch equations as well as a periodic particle seeding strategy are developed to reduce the computational cost. The velocity reconstruction pipeline is first validated by considering a Poiseuille flow configuration. The 4D Flow MRI simulation procedure is then applied to the flow within an in vitro flow phantom typical of the cardiovascular system. The simulated MR velocity images compare favorably to both the flow computed by solving the Navier-Stokes equations and experimental 4D Flow MRI measurements. A practical application is finally presented in which the MRI simulation framework is used to identify the origins of the MRI measurement errors. |
format | Online Article Text |
id | pubmed-7997039 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-79970392021-04-06 Numerical simulation of time-resolved 3D phase-contrast magnetic resonance imaging Puiseux, Thomas Sewonu, Anou Moreno, Ramiro Mendez, Simon Nicoud, Franck PLoS One Research Article A numerical approach is presented to efficiently simulate time-resolved 3D phase-contrast Magnetic resonance Imaging (or 4D Flow MRI) acquisitions under realistic flow conditions. The Navier-Stokes and Bloch equations are simultaneously solved with an Eulerian-Lagrangian formalism. A semi-analytic solution for the Bloch equations as well as a periodic particle seeding strategy are developed to reduce the computational cost. The velocity reconstruction pipeline is first validated by considering a Poiseuille flow configuration. The 4D Flow MRI simulation procedure is then applied to the flow within an in vitro flow phantom typical of the cardiovascular system. The simulated MR velocity images compare favorably to both the flow computed by solving the Navier-Stokes equations and experimental 4D Flow MRI measurements. A practical application is finally presented in which the MRI simulation framework is used to identify the origins of the MRI measurement errors. Public Library of Science 2021-03-26 /pmc/articles/PMC7997039/ /pubmed/33770130 http://dx.doi.org/10.1371/journal.pone.0248816 Text en © 2021 Puiseux et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Puiseux, Thomas Sewonu, Anou Moreno, Ramiro Mendez, Simon Nicoud, Franck Numerical simulation of time-resolved 3D phase-contrast magnetic resonance imaging |
title | Numerical simulation of time-resolved 3D phase-contrast magnetic resonance imaging |
title_full | Numerical simulation of time-resolved 3D phase-contrast magnetic resonance imaging |
title_fullStr | Numerical simulation of time-resolved 3D phase-contrast magnetic resonance imaging |
title_full_unstemmed | Numerical simulation of time-resolved 3D phase-contrast magnetic resonance imaging |
title_short | Numerical simulation of time-resolved 3D phase-contrast magnetic resonance imaging |
title_sort | numerical simulation of time-resolved 3d phase-contrast magnetic resonance imaging |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7997039/ https://www.ncbi.nlm.nih.gov/pubmed/33770130 http://dx.doi.org/10.1371/journal.pone.0248816 |
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