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Prolonged Unfrozen Storage and Repeated Freeze-Thawing of SARS-CoV-2 Patient Samples Have Minor Effects on SARS-CoV-2 Detectability by RT-PCR

Reliable transportation of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) patient samples from a swabbing station to a diagnostics facility is essential for accurate results. Therefore, cooling or freezing the samples is recommended in case of longer transportation times. In this study...

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Detalles Bibliográficos
Autores principales: Dzung, Andreas, Cheng, Phil F., Stoffel, Corinne, Tastanova, Aizhan, Turko, Patrick, Levesque, Mitchell P., Bosshard, Philipp P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Association for Molecular Pathology and American Society for Investigative Pathology. Published by Elsevier Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7997259/
https://www.ncbi.nlm.nih.gov/pubmed/33775845
http://dx.doi.org/10.1016/j.jmoldx.2021.03.003
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author Dzung, Andreas
Cheng, Phil F.
Stoffel, Corinne
Tastanova, Aizhan
Turko, Patrick
Levesque, Mitchell P.
Bosshard, Philipp P.
author_facet Dzung, Andreas
Cheng, Phil F.
Stoffel, Corinne
Tastanova, Aizhan
Turko, Patrick
Levesque, Mitchell P.
Bosshard, Philipp P.
author_sort Dzung, Andreas
collection PubMed
description Reliable transportation of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) patient samples from a swabbing station to a diagnostics facility is essential for accurate results. Therefore, cooling or freezing the samples is recommended in case of longer transportation times. In this study, SARS-CoV-2 detectability by RT-PCR was assessed after prolonged unfrozen storage or repetitive freeze-thawing of SARS-CoV-2 samples. SARS-CoV-2–positive patient swabs stored in viral transport medium were exposed to different temperatures (4°C, 25°C, and 35°C) and to repetitive freeze-thawing, to assess the effect of storage conditions on RT-PCR detection. SARS-CoV-2 RNA was still reliably detected by RT-PCR after 21 days of storage in viral transport medium, even when the samples had been stored at 35°C. The maximum observed change in cycle threshold value per day was 0.046 (±0.019) at 35°C, and the maximum observed change in cycle threshold value per freeze-thaw cycle per day was 0.197 (±0.06). Compared with storage at 4°C, viral RNA levels deviated little but significantly when stored at 25°C or 35°C, or after repeated freeze-thawing. The results of this study indicate that viral RNA levels are relatively stable at higher temperatures and repetitive freeze-thawing.
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spelling pubmed-79972592021-03-29 Prolonged Unfrozen Storage and Repeated Freeze-Thawing of SARS-CoV-2 Patient Samples Have Minor Effects on SARS-CoV-2 Detectability by RT-PCR Dzung, Andreas Cheng, Phil F. Stoffel, Corinne Tastanova, Aizhan Turko, Patrick Levesque, Mitchell P. Bosshard, Philipp P. J Mol Diagn Regular Article Reliable transportation of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) patient samples from a swabbing station to a diagnostics facility is essential for accurate results. Therefore, cooling or freezing the samples is recommended in case of longer transportation times. In this study, SARS-CoV-2 detectability by RT-PCR was assessed after prolonged unfrozen storage or repetitive freeze-thawing of SARS-CoV-2 samples. SARS-CoV-2–positive patient swabs stored in viral transport medium were exposed to different temperatures (4°C, 25°C, and 35°C) and to repetitive freeze-thawing, to assess the effect of storage conditions on RT-PCR detection. SARS-CoV-2 RNA was still reliably detected by RT-PCR after 21 days of storage in viral transport medium, even when the samples had been stored at 35°C. The maximum observed change in cycle threshold value per day was 0.046 (±0.019) at 35°C, and the maximum observed change in cycle threshold value per freeze-thaw cycle per day was 0.197 (±0.06). Compared with storage at 4°C, viral RNA levels deviated little but significantly when stored at 25°C or 35°C, or after repeated freeze-thawing. The results of this study indicate that viral RNA levels are relatively stable at higher temperatures and repetitive freeze-thawing. Association for Molecular Pathology and American Society for Investigative Pathology. Published by Elsevier Inc. 2021-06 2021-03-26 /pmc/articles/PMC7997259/ /pubmed/33775845 http://dx.doi.org/10.1016/j.jmoldx.2021.03.003 Text en © 2021 Association for Molecular Pathology and American Society for Investigative Pathology. Published by Elsevier Inc. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Regular Article
Dzung, Andreas
Cheng, Phil F.
Stoffel, Corinne
Tastanova, Aizhan
Turko, Patrick
Levesque, Mitchell P.
Bosshard, Philipp P.
Prolonged Unfrozen Storage and Repeated Freeze-Thawing of SARS-CoV-2 Patient Samples Have Minor Effects on SARS-CoV-2 Detectability by RT-PCR
title Prolonged Unfrozen Storage and Repeated Freeze-Thawing of SARS-CoV-2 Patient Samples Have Minor Effects on SARS-CoV-2 Detectability by RT-PCR
title_full Prolonged Unfrozen Storage and Repeated Freeze-Thawing of SARS-CoV-2 Patient Samples Have Minor Effects on SARS-CoV-2 Detectability by RT-PCR
title_fullStr Prolonged Unfrozen Storage and Repeated Freeze-Thawing of SARS-CoV-2 Patient Samples Have Minor Effects on SARS-CoV-2 Detectability by RT-PCR
title_full_unstemmed Prolonged Unfrozen Storage and Repeated Freeze-Thawing of SARS-CoV-2 Patient Samples Have Minor Effects on SARS-CoV-2 Detectability by RT-PCR
title_short Prolonged Unfrozen Storage and Repeated Freeze-Thawing of SARS-CoV-2 Patient Samples Have Minor Effects on SARS-CoV-2 Detectability by RT-PCR
title_sort prolonged unfrozen storage and repeated freeze-thawing of sars-cov-2 patient samples have minor effects on sars-cov-2 detectability by rt-pcr
topic Regular Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7997259/
https://www.ncbi.nlm.nih.gov/pubmed/33775845
http://dx.doi.org/10.1016/j.jmoldx.2021.03.003
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