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Simplified Approach for Preparing Graphene Oxide TEM Grids for Stained and Vitrified Biomolecules
In this manuscript, we report the application of graphene oxide (GO) in the preparation of cryo-electron microscopy (cryo-EM) and transmission electron microscopy (TEM) grids. We treated GO with water and organic solvents, such as, methanol, ethanol and isopropanol separately to isolate significantl...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7999706/ https://www.ncbi.nlm.nih.gov/pubmed/33808009 http://dx.doi.org/10.3390/nano11030643 |
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author | Kumar, Anil Sengupta, Nayanika Dutta, Somnath |
author_facet | Kumar, Anil Sengupta, Nayanika Dutta, Somnath |
author_sort | Kumar, Anil |
collection | PubMed |
description | In this manuscript, we report the application of graphene oxide (GO) in the preparation of cryo-electron microscopy (cryo-EM) and transmission electron microscopy (TEM) grids. We treated GO with water and organic solvents, such as, methanol, ethanol and isopropanol separately to isolate significantly large GO monolayer flake to fabricate the grids for cryo-EM and TEM study. We implemented a simplified approach to isolate flakes of GO monolayer for constructing the TEM grids, independent of expensive heavy equipment (Langmuir–Blodgett trough, glow-discharge system, carbon-evaporator or plasma-cleaner or peristaltic pumps). We employed confocal microscopy, SEM and TEM to characterize the flake size, stability and transparency of the GO monolayer and atomic force microscopy (AFM) to probe the depth of GO coated grids. Additionally, GO grids are visualized at cryogenic condition for suitability of GO monolayer for cryo-EM study. In addition, GO-Met-H(2)O grids reduce the effect of preferred orientation of biological macromolecules within the amorphous ice. The power-spectrum and contrast-transfer-function unequivocally suggest that GO-Met-H(2)O fabricated holey grids have excellent potential for application in high-resolution structural characterization of biomolecules. Furthermore, only 200 movies and ~8000 70S ribosome particles are selected on GO-coated grids for cryo-EM reconstruction to achieve high-resolution structure. |
format | Online Article Text |
id | pubmed-7999706 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-79997062021-03-28 Simplified Approach for Preparing Graphene Oxide TEM Grids for Stained and Vitrified Biomolecules Kumar, Anil Sengupta, Nayanika Dutta, Somnath Nanomaterials (Basel) Article In this manuscript, we report the application of graphene oxide (GO) in the preparation of cryo-electron microscopy (cryo-EM) and transmission electron microscopy (TEM) grids. We treated GO with water and organic solvents, such as, methanol, ethanol and isopropanol separately to isolate significantly large GO monolayer flake to fabricate the grids for cryo-EM and TEM study. We implemented a simplified approach to isolate flakes of GO monolayer for constructing the TEM grids, independent of expensive heavy equipment (Langmuir–Blodgett trough, glow-discharge system, carbon-evaporator or plasma-cleaner or peristaltic pumps). We employed confocal microscopy, SEM and TEM to characterize the flake size, stability and transparency of the GO monolayer and atomic force microscopy (AFM) to probe the depth of GO coated grids. Additionally, GO grids are visualized at cryogenic condition for suitability of GO monolayer for cryo-EM study. In addition, GO-Met-H(2)O grids reduce the effect of preferred orientation of biological macromolecules within the amorphous ice. The power-spectrum and contrast-transfer-function unequivocally suggest that GO-Met-H(2)O fabricated holey grids have excellent potential for application in high-resolution structural characterization of biomolecules. Furthermore, only 200 movies and ~8000 70S ribosome particles are selected on GO-coated grids for cryo-EM reconstruction to achieve high-resolution structure. MDPI 2021-03-05 /pmc/articles/PMC7999706/ /pubmed/33808009 http://dx.doi.org/10.3390/nano11030643 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ). |
spellingShingle | Article Kumar, Anil Sengupta, Nayanika Dutta, Somnath Simplified Approach for Preparing Graphene Oxide TEM Grids for Stained and Vitrified Biomolecules |
title | Simplified Approach for Preparing Graphene Oxide TEM Grids for Stained and Vitrified Biomolecules |
title_full | Simplified Approach for Preparing Graphene Oxide TEM Grids for Stained and Vitrified Biomolecules |
title_fullStr | Simplified Approach for Preparing Graphene Oxide TEM Grids for Stained and Vitrified Biomolecules |
title_full_unstemmed | Simplified Approach for Preparing Graphene Oxide TEM Grids for Stained and Vitrified Biomolecules |
title_short | Simplified Approach for Preparing Graphene Oxide TEM Grids for Stained and Vitrified Biomolecules |
title_sort | simplified approach for preparing graphene oxide tem grids for stained and vitrified biomolecules |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7999706/ https://www.ncbi.nlm.nih.gov/pubmed/33808009 http://dx.doi.org/10.3390/nano11030643 |
work_keys_str_mv | AT kumaranil simplifiedapproachforpreparinggrapheneoxidetemgridsforstainedandvitrifiedbiomolecules AT senguptanayanika simplifiedapproachforpreparinggrapheneoxidetemgridsforstainedandvitrifiedbiomolecules AT duttasomnath simplifiedapproachforpreparinggrapheneoxidetemgridsforstainedandvitrifiedbiomolecules |