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Subunits of the PBAP Chromatin Remodeler Are Capable of Mediating Enhancer-Driven Transcription in Drosophila
The chromatin remodeler SWI/SNF is an important participant in gene activation, functioning predominantly by opening the chromatin structure on promoters and enhancers. Here, we describe its novel mode of action in which SWI/SNF factors mediate the targeted action of an enhancer. We studied the func...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7999800/ https://www.ncbi.nlm.nih.gov/pubmed/33799739 http://dx.doi.org/10.3390/ijms22062856 |
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author | Shidlovskii, Yulii V. Bylino, Oleg V. Shaposhnikov, Alexander V. Kachaev, Zaur M. Lebedeva, Lyubov A. Kolesnik, Valeria V. Amendola, Diego De Simone, Giovanna Formicola, Nadia Schedl, Paul Digilio, Filomena Anna Giordano, Ennio |
author_facet | Shidlovskii, Yulii V. Bylino, Oleg V. Shaposhnikov, Alexander V. Kachaev, Zaur M. Lebedeva, Lyubov A. Kolesnik, Valeria V. Amendola, Diego De Simone, Giovanna Formicola, Nadia Schedl, Paul Digilio, Filomena Anna Giordano, Ennio |
author_sort | Shidlovskii, Yulii V. |
collection | PubMed |
description | The chromatin remodeler SWI/SNF is an important participant in gene activation, functioning predominantly by opening the chromatin structure on promoters and enhancers. Here, we describe its novel mode of action in which SWI/SNF factors mediate the targeted action of an enhancer. We studied the functions of two signature subunits of PBAP subfamily, BAP170 and SAYP, in Drosophila. These subunits were stably tethered to a transgene reporter carrying the hsp70 core promoter. The tethered subunits mediate transcription of the reporter in a pattern that is generated by enhancers close to the insertion site in multiple loci throughout the genome. Both tethered SAYP and BAP170 recruit the whole PBAP complex to the reporter promoter. However, we found that BAP170-dependent transcription is more resistant to the depletion of other PBAP subunits, suggesting that BAP170 may play a more critical role in establishing enhancer-dependent transcription. |
format | Online Article Text |
id | pubmed-7999800 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-79998002021-03-28 Subunits of the PBAP Chromatin Remodeler Are Capable of Mediating Enhancer-Driven Transcription in Drosophila Shidlovskii, Yulii V. Bylino, Oleg V. Shaposhnikov, Alexander V. Kachaev, Zaur M. Lebedeva, Lyubov A. Kolesnik, Valeria V. Amendola, Diego De Simone, Giovanna Formicola, Nadia Schedl, Paul Digilio, Filomena Anna Giordano, Ennio Int J Mol Sci Article The chromatin remodeler SWI/SNF is an important participant in gene activation, functioning predominantly by opening the chromatin structure on promoters and enhancers. Here, we describe its novel mode of action in which SWI/SNF factors mediate the targeted action of an enhancer. We studied the functions of two signature subunits of PBAP subfamily, BAP170 and SAYP, in Drosophila. These subunits were stably tethered to a transgene reporter carrying the hsp70 core promoter. The tethered subunits mediate transcription of the reporter in a pattern that is generated by enhancers close to the insertion site in multiple loci throughout the genome. Both tethered SAYP and BAP170 recruit the whole PBAP complex to the reporter promoter. However, we found that BAP170-dependent transcription is more resistant to the depletion of other PBAP subunits, suggesting that BAP170 may play a more critical role in establishing enhancer-dependent transcription. MDPI 2021-03-11 /pmc/articles/PMC7999800/ /pubmed/33799739 http://dx.doi.org/10.3390/ijms22062856 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Shidlovskii, Yulii V. Bylino, Oleg V. Shaposhnikov, Alexander V. Kachaev, Zaur M. Lebedeva, Lyubov A. Kolesnik, Valeria V. Amendola, Diego De Simone, Giovanna Formicola, Nadia Schedl, Paul Digilio, Filomena Anna Giordano, Ennio Subunits of the PBAP Chromatin Remodeler Are Capable of Mediating Enhancer-Driven Transcription in Drosophila |
title | Subunits of the PBAP Chromatin Remodeler Are Capable of Mediating Enhancer-Driven Transcription in Drosophila |
title_full | Subunits of the PBAP Chromatin Remodeler Are Capable of Mediating Enhancer-Driven Transcription in Drosophila |
title_fullStr | Subunits of the PBAP Chromatin Remodeler Are Capable of Mediating Enhancer-Driven Transcription in Drosophila |
title_full_unstemmed | Subunits of the PBAP Chromatin Remodeler Are Capable of Mediating Enhancer-Driven Transcription in Drosophila |
title_short | Subunits of the PBAP Chromatin Remodeler Are Capable of Mediating Enhancer-Driven Transcription in Drosophila |
title_sort | subunits of the pbap chromatin remodeler are capable of mediating enhancer-driven transcription in drosophila |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7999800/ https://www.ncbi.nlm.nih.gov/pubmed/33799739 http://dx.doi.org/10.3390/ijms22062856 |
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