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Subunits of the PBAP Chromatin Remodeler Are Capable of Mediating Enhancer-Driven Transcription in Drosophila

The chromatin remodeler SWI/SNF is an important participant in gene activation, functioning predominantly by opening the chromatin structure on promoters and enhancers. Here, we describe its novel mode of action in which SWI/SNF factors mediate the targeted action of an enhancer. We studied the func...

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Autores principales: Shidlovskii, Yulii V., Bylino, Oleg V., Shaposhnikov, Alexander V., Kachaev, Zaur M., Lebedeva, Lyubov A., Kolesnik, Valeria V., Amendola, Diego, De Simone, Giovanna, Formicola, Nadia, Schedl, Paul, Digilio, Filomena Anna, Giordano, Ennio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7999800/
https://www.ncbi.nlm.nih.gov/pubmed/33799739
http://dx.doi.org/10.3390/ijms22062856
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author Shidlovskii, Yulii V.
Bylino, Oleg V.
Shaposhnikov, Alexander V.
Kachaev, Zaur M.
Lebedeva, Lyubov A.
Kolesnik, Valeria V.
Amendola, Diego
De Simone, Giovanna
Formicola, Nadia
Schedl, Paul
Digilio, Filomena Anna
Giordano, Ennio
author_facet Shidlovskii, Yulii V.
Bylino, Oleg V.
Shaposhnikov, Alexander V.
Kachaev, Zaur M.
Lebedeva, Lyubov A.
Kolesnik, Valeria V.
Amendola, Diego
De Simone, Giovanna
Formicola, Nadia
Schedl, Paul
Digilio, Filomena Anna
Giordano, Ennio
author_sort Shidlovskii, Yulii V.
collection PubMed
description The chromatin remodeler SWI/SNF is an important participant in gene activation, functioning predominantly by opening the chromatin structure on promoters and enhancers. Here, we describe its novel mode of action in which SWI/SNF factors mediate the targeted action of an enhancer. We studied the functions of two signature subunits of PBAP subfamily, BAP170 and SAYP, in Drosophila. These subunits were stably tethered to a transgene reporter carrying the hsp70 core promoter. The tethered subunits mediate transcription of the reporter in a pattern that is generated by enhancers close to the insertion site in multiple loci throughout the genome. Both tethered SAYP and BAP170 recruit the whole PBAP complex to the reporter promoter. However, we found that BAP170-dependent transcription is more resistant to the depletion of other PBAP subunits, suggesting that BAP170 may play a more critical role in establishing enhancer-dependent transcription.
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spelling pubmed-79998002021-03-28 Subunits of the PBAP Chromatin Remodeler Are Capable of Mediating Enhancer-Driven Transcription in Drosophila Shidlovskii, Yulii V. Bylino, Oleg V. Shaposhnikov, Alexander V. Kachaev, Zaur M. Lebedeva, Lyubov A. Kolesnik, Valeria V. Amendola, Diego De Simone, Giovanna Formicola, Nadia Schedl, Paul Digilio, Filomena Anna Giordano, Ennio Int J Mol Sci Article The chromatin remodeler SWI/SNF is an important participant in gene activation, functioning predominantly by opening the chromatin structure on promoters and enhancers. Here, we describe its novel mode of action in which SWI/SNF factors mediate the targeted action of an enhancer. We studied the functions of two signature subunits of PBAP subfamily, BAP170 and SAYP, in Drosophila. These subunits were stably tethered to a transgene reporter carrying the hsp70 core promoter. The tethered subunits mediate transcription of the reporter in a pattern that is generated by enhancers close to the insertion site in multiple loci throughout the genome. Both tethered SAYP and BAP170 recruit the whole PBAP complex to the reporter promoter. However, we found that BAP170-dependent transcription is more resistant to the depletion of other PBAP subunits, suggesting that BAP170 may play a more critical role in establishing enhancer-dependent transcription. MDPI 2021-03-11 /pmc/articles/PMC7999800/ /pubmed/33799739 http://dx.doi.org/10.3390/ijms22062856 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Shidlovskii, Yulii V.
Bylino, Oleg V.
Shaposhnikov, Alexander V.
Kachaev, Zaur M.
Lebedeva, Lyubov A.
Kolesnik, Valeria V.
Amendola, Diego
De Simone, Giovanna
Formicola, Nadia
Schedl, Paul
Digilio, Filomena Anna
Giordano, Ennio
Subunits of the PBAP Chromatin Remodeler Are Capable of Mediating Enhancer-Driven Transcription in Drosophila
title Subunits of the PBAP Chromatin Remodeler Are Capable of Mediating Enhancer-Driven Transcription in Drosophila
title_full Subunits of the PBAP Chromatin Remodeler Are Capable of Mediating Enhancer-Driven Transcription in Drosophila
title_fullStr Subunits of the PBAP Chromatin Remodeler Are Capable of Mediating Enhancer-Driven Transcription in Drosophila
title_full_unstemmed Subunits of the PBAP Chromatin Remodeler Are Capable of Mediating Enhancer-Driven Transcription in Drosophila
title_short Subunits of the PBAP Chromatin Remodeler Are Capable of Mediating Enhancer-Driven Transcription in Drosophila
title_sort subunits of the pbap chromatin remodeler are capable of mediating enhancer-driven transcription in drosophila
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7999800/
https://www.ncbi.nlm.nih.gov/pubmed/33799739
http://dx.doi.org/10.3390/ijms22062856
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