Cargando…

Discovery of RSV-Induced BRD4 Protein Interactions Using Native Immunoprecipitation and Parallel Accumulation—Serial Fragmentation (PASEF) Mass Spectrometry

Respiratory Syncytial Virus (RSV) causes severe inflammation and airway pathology in children and the elderly by infecting the epithelial cells of the upper and lower respiratory tract. RSV replication is sensed by intracellular pattern recognition receptors upstream of the IRF and NF-κB transcripti...

Descripción completa

Detalles Bibliográficos
Autores principales:	Mann, Morgan, Roberts, David S., Zhu, Yanlong, Li, Yi, Zhou, Jia, Ge, Ying, Brasier, Allan R.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2021
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8000986/ https://www.ncbi.nlm.nih.gov/pubmed/33799525 http://dx.doi.org/10.3390/v13030454

Ejemplares similares

Online Parallel Accumulation–Serial Fragmentation (PASEF) with a Novel Trapped Ion Mobility Mass Spectrometer
por: Meier, Florian, et al.
Publicado: (2018)

Trapped Ion Mobility Spectrometry and Parallel Accumulation–Serial Fragmentation in Proteomics
por: Meier, Florian, et al.
Publicado: (2021)

RSV Reprograms the CDK9•BRD4 Chromatin Remodeling Complex to Couple Innate Inflammation to Airway Remodeling
por: Brasier, Allan R.
Publicado: (2020)

Trapped ion mobility spectrometry and PASEF enable in-depth lipidomics from minimal sample amounts
por: Vasilopoulou, Catherine G., et al.
Publicado: (2020)

Synchro-PASEF Allows Precursor-Specific Fragment Ion Extraction and Interference Removal in Data-Independent Acquisition
por: Skowronek, Patricia, et al.
Publicado: (2022)

Sensitive, High-Throughput HLA-I and HLA-II Immunopeptidomics Using Parallel Accumulation-Serial Fragmentation Mass Spectrometry
por: Phulphagar, Kshiti Meera, et al.
Publicado: (2023)

Proteomic datasets of HeLa and SiHa cell lines acquired by DDA-PASEF and diaPASEF
por: Huang, Zelu, et al.
Publicado: (2022)

MultiPro: DDA-PASEF and diaPASEF acquired cell line proteomic datasets with deliberate batch effects
por: Wang, He, et al.
Publicado: (2023)

Benefits of Collisional Cross Section Assisted Precursor Selection (caps-PASEF) for Cross-linking Mass Spectrometry
por: Steigenberger, Barbara, et al.
Publicado: (2020)

Native Mass Spectrometry in Fragment-Based Drug Discovery
por: Pedro, Liliana, et al.
Publicado: (2016)

Alternative mRNA Processing of Innate Response Pathways in Respiratory Syncytial Virus (RSV) Infection
por: Xu, Xiaofang, et al.
Publicado: (2021)

Improved Elution Conditions for Native Co-Immunoprecipitation
por: Antrobus, Robin, et al.
Publicado: (2011)

Native Mass Spectrometry of BRD4 Bromodomains Linked to a Long Disordered Region
por: Azegami, Nanako, et al.
Publicado: (2022)

Rapid and In-Depth Coverage of the (Phospho-)Proteome With Deep Libraries and Optimal Window Design for dia-PASEF
por: Skowronek, Patricia, et al.
Publicado: (2022)

Bromodomain Containing Protein 4 (BRD4) Regulates Expression of its Interacting Coactivators in the Innate Response to Respiratory Syncytial Virus
por: Xu, Xiaofang, et al.
Publicado: (2021)

Fast Quantitative Analysis of timsTOF PASEF Data with MSFragger and IonQuant
por: Yu, Fengchao, et al.
Publicado: (2020)

Human amygdala involvement in Alzheimer's disease revealed by stereological and dia‐PASEF analysis
por: Gonzalez‐Rodriguez, Melania, et al.
Publicado: (2023)

Increasing taxonomic and functional characterization of host-microbiome interactions by DIA-PASEF metaproteomics
por: Gómez-Varela, David, et al.
Publicado: (2023)

Generation of Native Chromatin Immunoprecipitation Sequencing Libraries for Nucleosome Density Analysis
por: Lorzadeh, Alireza, et al.
Publicado: (2017)

Benefits of Ion Mobility Separation and Parallel Accumulation–Serial Fragmentation Technology on timsTOF Pro for the Needs of Fast Photochemical Oxidation of Protein Analysis
por: Loginov, Dmitry S., et al.
Publicado: (2021)

Correction to “Benefits of Ion Mobility Separation and Parallel Accumulation–Serial Fragmentation Technology on timsTOF Pro for the Needs of Fast Photochemical Oxidation of Protein Analysis”
por: Loginov, Dmitry S., et al.
Publicado: (2021)

Immunoprecipitation and mass spectrometry define TET1 interactome during oligodendrocyte differentiation
por: Zhang, Ming, et al.
Publicado: (2020)

Highly Specific Protein Identification by Immunoprecipitation–Mass Spectrometry Using Antifouling Microbeads
por: van Andel, Esther, et al.
Publicado: (2022)

Towards the Definition of the Molecular Hallmarks of Idiopathic Membranous Nephropathy in Serum Proteome: A DIA-PASEF Approach
por: Previtali, Paolo, et al.
Publicado: (2023)

Extensive chromatin fragmentation improves enrichment of protein binding sites in chromatin immunoprecipitation experiments
por: Fan, Xiaochun, et al.
Publicado: (2008)

TUNEL labeling with BrdUTP/anti-BrdUTP greatly underestimates the level of sperm DNA fragmentation in semen evaluation
por: Ribeiro, Sofia C., et al.
Publicado: (2017)

Proteins that bind regulatory regions identified by histone modification chromatin immunoprecipitations and mass spectrometry
por: Engelen, Erik, et al.
Publicado: (2015)

Identification of new binding proteins of focal adhesion kinase using immunoprecipitation and mass spectrometry
por: Nguyen, Binh Thanh, et al.
Publicado: (2019)

RSV replication modifies the XBP1s binding complex on the IRF1 upstream enhancer to potentiate the mucosal anti-viral response
por: Qiao, Dianhua, et al.
Publicado: (2023)

dia-PASEF data analysis using FragPipe and DIA-NN for deep proteomics of low sample amounts
por: Demichev, Vadim, et al.
Publicado: (2022)

RELA∙8-Oxoguanine DNA Glycosylase1 Is an Epigenetic Regulatory Complex Coordinating the Hexosamine Biosynthetic Pathway in RSV Infection
por: Xu, Xiaofang, et al.
Publicado: (2022)

A native chromatin immunoprecipitation (ChIP) protocol for studying histone modifications in strawberry fruits
por: Huang, Xiaorong, et al.
Publicado: (2020)

Native RNA G quadruplex immunoprecipitation (rG4IP) from mammalian cells
por: Surani, Arif A., et al.
Publicado: (2022)

Beads-free protein immunoprecipitation for a mass spectrometry-based interactome and posttranslational modifications analysis
por: Mikula, Michal, et al.
Publicado: (2015)

Serial and Parallel Random Number Generation
por: CERN. Geneva
Publicado: (2006)

“Serial” effects in parallel models of reading
por: Chang, Ya-Ning, et al.
Publicado: (2012)

Effective Identification of Akt Interacting Proteins by Two-Step Chemical Crosslinking, Co-Immunoprecipitation and Mass Spectrometry
por: Huang, Bill X., et al.
Publicado: (2013)

Rapid immunoprecipitation mass spectrometry of endogenous protein (RIME) to identify chromatin-interactome in prostate cancer cells
por: Scholtes, Charlotte, et al.
Publicado: (2022)

Quantitative BrdU immunoprecipitation method demonstrates that Fkh1 and Fkh2 are rate-limiting activators of replication origins that reprogram replication timing in G1 phase
por: Peace, Jared M., et al.
Publicado: (2016)

Fast chromatin immunoprecipitation assay
por: Nelson, Joel D., et al.
Publicado: (2006)

Cannot write session to /tmp/vufind_sessions/sess_elgmut50o8p39o922101s5d241