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Spatiotemporal Analysis of COVID-19 Incidence Data

(1) Background: A better understanding of COVID-19 dynamics in terms of interactions among individuals would be of paramount importance to increase the effectiveness of containment measures. Despite this, the research lacks spatiotemporal statistical and mathematical analysis based on large datasets...

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Autores principales: Spassiani, Ilaria, Sebastiani, Giovanni, Palù, Giorgio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8001833/
https://www.ncbi.nlm.nih.gov/pubmed/33799900
http://dx.doi.org/10.3390/v13030463
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author Spassiani, Ilaria
Sebastiani, Giovanni
Palù, Giorgio
author_facet Spassiani, Ilaria
Sebastiani, Giovanni
Palù, Giorgio
author_sort Spassiani, Ilaria
collection PubMed
description (1) Background: A better understanding of COVID-19 dynamics in terms of interactions among individuals would be of paramount importance to increase the effectiveness of containment measures. Despite this, the research lacks spatiotemporal statistical and mathematical analysis based on large datasets. We describe a novel methodology to extract useful spatiotemporal information from COVID-19 pandemic data. (2) Methods: We perform specific analyses based on mathematical and statistical tools, like mathematical morphology, hierarchical clustering, parametric data modeling and non-parametric statistics. These analyses are here applied to the large dataset consisting of about 19,000 COVID-19 patients in the Veneto region (Italy) during the entire Italian national lockdown. (3) Results: We estimate the COVID-19 cumulative incidence spatial distribution, significantly reducing image noise. We identify four clusters of connected provinces based on the temporal evolution of the incidence. Surprisingly, while one cluster consists of three neighboring provinces, another one contains two provinces more than 210 km apart by highway. The survival function of the local spatial incidence values is modeled here by a tapered Pareto model, also used in other applied fields like seismology and economy in connection to networks. Model’s parameters could be relevant to describe quantitatively the epidemic. (4) Conclusion: The proposed methodology can be applied to a general situation, potentially helping to adopt strategic decisions such as the restriction of mobility and gatherings.
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spelling pubmed-80018332021-03-28 Spatiotemporal Analysis of COVID-19 Incidence Data Spassiani, Ilaria Sebastiani, Giovanni Palù, Giorgio Viruses Article (1) Background: A better understanding of COVID-19 dynamics in terms of interactions among individuals would be of paramount importance to increase the effectiveness of containment measures. Despite this, the research lacks spatiotemporal statistical and mathematical analysis based on large datasets. We describe a novel methodology to extract useful spatiotemporal information from COVID-19 pandemic data. (2) Methods: We perform specific analyses based on mathematical and statistical tools, like mathematical morphology, hierarchical clustering, parametric data modeling and non-parametric statistics. These analyses are here applied to the large dataset consisting of about 19,000 COVID-19 patients in the Veneto region (Italy) during the entire Italian national lockdown. (3) Results: We estimate the COVID-19 cumulative incidence spatial distribution, significantly reducing image noise. We identify four clusters of connected provinces based on the temporal evolution of the incidence. Surprisingly, while one cluster consists of three neighboring provinces, another one contains two provinces more than 210 km apart by highway. The survival function of the local spatial incidence values is modeled here by a tapered Pareto model, also used in other applied fields like seismology and economy in connection to networks. Model’s parameters could be relevant to describe quantitatively the epidemic. (4) Conclusion: The proposed methodology can be applied to a general situation, potentially helping to adopt strategic decisions such as the restriction of mobility and gatherings. MDPI 2021-03-11 /pmc/articles/PMC8001833/ /pubmed/33799900 http://dx.doi.org/10.3390/v13030463 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ).
spellingShingle Article
Spassiani, Ilaria
Sebastiani, Giovanni
Palù, Giorgio
Spatiotemporal Analysis of COVID-19 Incidence Data
title Spatiotemporal Analysis of COVID-19 Incidence Data
title_full Spatiotemporal Analysis of COVID-19 Incidence Data
title_fullStr Spatiotemporal Analysis of COVID-19 Incidence Data
title_full_unstemmed Spatiotemporal Analysis of COVID-19 Incidence Data
title_short Spatiotemporal Analysis of COVID-19 Incidence Data
title_sort spatiotemporal analysis of covid-19 incidence data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8001833/
https://www.ncbi.nlm.nih.gov/pubmed/33799900
http://dx.doi.org/10.3390/v13030463
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