Cargando…

Manual and Automatic Image Analysis Segmentation Methods for Blood Flow Studies in Microchannels

In blood flow studies, image analysis plays an extremely important role to examine raw data obtained by high-speed video microscopy systems. This work shows different ways to process the images which contain various blood phenomena happening in microfluidic devices and in microcirculation. For this...

Descripción completa

Detalles Bibliográficos
Autores principales: Carvalho, Violeta, Gonçalves, Inês M., Souza, Andrews, Souza, Maria S., Bento, David, Ribeiro, João E., Lima, Rui, Pinho, Diana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8002955/
https://www.ncbi.nlm.nih.gov/pubmed/33803615
http://dx.doi.org/10.3390/mi12030317
_version_ 1783671575683268608
author Carvalho, Violeta
Gonçalves, Inês M.
Souza, Andrews
Souza, Maria S.
Bento, David
Ribeiro, João E.
Lima, Rui
Pinho, Diana
author_facet Carvalho, Violeta
Gonçalves, Inês M.
Souza, Andrews
Souza, Maria S.
Bento, David
Ribeiro, João E.
Lima, Rui
Pinho, Diana
author_sort Carvalho, Violeta
collection PubMed
description In blood flow studies, image analysis plays an extremely important role to examine raw data obtained by high-speed video microscopy systems. This work shows different ways to process the images which contain various blood phenomena happening in microfluidic devices and in microcirculation. For this purpose, the current methods used for tracking red blood cells (RBCs) flowing through a glass capillary and techniques to measure the cell-free layer thickness in different kinds of microchannels will be presented. Most of the past blood flow experimental data have been collected and analyzed by means of manual methods, that can be extremely reliable, but they are highly time-consuming, user-intensive, repetitive, and the results can be subjective to user-induced errors. For this reason, it is crucial to develop image analysis methods able to obtain the data automatically. Concerning automatic image analysis methods for individual RBCs tracking and to measure the well known microfluidic phenomena cell-free layer, two developed methods are presented and discussed in order to demonstrate their feasibility to obtain accurate data acquisition in such studies. Additionally, a comparison analysis between manual and automatic methods was performed.
format Online
Article
Text
id pubmed-8002955
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-80029552021-03-28 Manual and Automatic Image Analysis Segmentation Methods for Blood Flow Studies in Microchannels Carvalho, Violeta Gonçalves, Inês M. Souza, Andrews Souza, Maria S. Bento, David Ribeiro, João E. Lima, Rui Pinho, Diana Micromachines (Basel) Review In blood flow studies, image analysis plays an extremely important role to examine raw data obtained by high-speed video microscopy systems. This work shows different ways to process the images which contain various blood phenomena happening in microfluidic devices and in microcirculation. For this purpose, the current methods used for tracking red blood cells (RBCs) flowing through a glass capillary and techniques to measure the cell-free layer thickness in different kinds of microchannels will be presented. Most of the past blood flow experimental data have been collected and analyzed by means of manual methods, that can be extremely reliable, but they are highly time-consuming, user-intensive, repetitive, and the results can be subjective to user-induced errors. For this reason, it is crucial to develop image analysis methods able to obtain the data automatically. Concerning automatic image analysis methods for individual RBCs tracking and to measure the well known microfluidic phenomena cell-free layer, two developed methods are presented and discussed in order to demonstrate their feasibility to obtain accurate data acquisition in such studies. Additionally, a comparison analysis between manual and automatic methods was performed. MDPI 2021-03-18 /pmc/articles/PMC8002955/ /pubmed/33803615 http://dx.doi.org/10.3390/mi12030317 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ).
spellingShingle Review
Carvalho, Violeta
Gonçalves, Inês M.
Souza, Andrews
Souza, Maria S.
Bento, David
Ribeiro, João E.
Lima, Rui
Pinho, Diana
Manual and Automatic Image Analysis Segmentation Methods for Blood Flow Studies in Microchannels
title Manual and Automatic Image Analysis Segmentation Methods for Blood Flow Studies in Microchannels
title_full Manual and Automatic Image Analysis Segmentation Methods for Blood Flow Studies in Microchannels
title_fullStr Manual and Automatic Image Analysis Segmentation Methods for Blood Flow Studies in Microchannels
title_full_unstemmed Manual and Automatic Image Analysis Segmentation Methods for Blood Flow Studies in Microchannels
title_short Manual and Automatic Image Analysis Segmentation Methods for Blood Flow Studies in Microchannels
title_sort manual and automatic image analysis segmentation methods for blood flow studies in microchannels
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8002955/
https://www.ncbi.nlm.nih.gov/pubmed/33803615
http://dx.doi.org/10.3390/mi12030317
work_keys_str_mv AT carvalhovioleta manualandautomaticimageanalysissegmentationmethodsforbloodflowstudiesinmicrochannels
AT goncalvesinesm manualandautomaticimageanalysissegmentationmethodsforbloodflowstudiesinmicrochannels
AT souzaandrews manualandautomaticimageanalysissegmentationmethodsforbloodflowstudiesinmicrochannels
AT souzamarias manualandautomaticimageanalysissegmentationmethodsforbloodflowstudiesinmicrochannels
AT bentodavid manualandautomaticimageanalysissegmentationmethodsforbloodflowstudiesinmicrochannels
AT ribeirojoaoe manualandautomaticimageanalysissegmentationmethodsforbloodflowstudiesinmicrochannels
AT limarui manualandautomaticimageanalysissegmentationmethodsforbloodflowstudiesinmicrochannels
AT pinhodiana manualandautomaticimageanalysissegmentationmethodsforbloodflowstudiesinmicrochannels