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Proteomic Analysis of Mycelial Exudates of Ustilaginoidea virens

Rice false smut (RFS) disease, which is caused by Ustilaginoidea virens, has been widespread all over the world in recent years, causing irreversible losses. Under artificial culture conditions, exudates will appear on colonies of U. virens during the growth of the hyphae. Exudation of droplets is a...

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Autores principales: Wang, Haining, Yang, Xiaohe, Wei, Songhong, Wang, Yan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8003167/
https://www.ncbi.nlm.nih.gov/pubmed/33803797
http://dx.doi.org/10.3390/pathogens10030364
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author Wang, Haining
Yang, Xiaohe
Wei, Songhong
Wang, Yan
author_facet Wang, Haining
Yang, Xiaohe
Wei, Songhong
Wang, Yan
author_sort Wang, Haining
collection PubMed
description Rice false smut (RFS) disease, which is caused by Ustilaginoidea virens, has been widespread all over the world in recent years, causing irreversible losses. Under artificial culture conditions, exudates will appear on colonies of U. virens during the growth of the hyphae. Exudation of droplets is a common feature in many fungi, but the functions of exudates are undetermined. As the executors of life functions, proteins can intuitively reflect the functions of exudates. Shotgun proteomics were used in this study. A total of 650 proteins were identified in the exudate of U. virens, and the raw data were made available via ProteomeXchange with the identifier PXD019861. There were 57 subcategories and 167 pathways annotated with Gene Ontology (GO) classification and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis, respectively. Through protein–protein interaction (PPI) network analysis, it was found that 20 proteins participated in the biosynthesis of secondary metabolites. Two separate PPI analyses were performed for carbon metabolism and microbial metabolism in diverse environments. After comparing and annotating the functions of proteins of the exudate, it was speculated that the exudate was involved in the construction and remodeling of the fungal cell wall. Pathogenicity, sporulation, and antioxidant effects might all be affected by the exudate.
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spelling pubmed-80031672021-03-28 Proteomic Analysis of Mycelial Exudates of Ustilaginoidea virens Wang, Haining Yang, Xiaohe Wei, Songhong Wang, Yan Pathogens Article Rice false smut (RFS) disease, which is caused by Ustilaginoidea virens, has been widespread all over the world in recent years, causing irreversible losses. Under artificial culture conditions, exudates will appear on colonies of U. virens during the growth of the hyphae. Exudation of droplets is a common feature in many fungi, but the functions of exudates are undetermined. As the executors of life functions, proteins can intuitively reflect the functions of exudates. Shotgun proteomics were used in this study. A total of 650 proteins were identified in the exudate of U. virens, and the raw data were made available via ProteomeXchange with the identifier PXD019861. There were 57 subcategories and 167 pathways annotated with Gene Ontology (GO) classification and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis, respectively. Through protein–protein interaction (PPI) network analysis, it was found that 20 proteins participated in the biosynthesis of secondary metabolites. Two separate PPI analyses were performed for carbon metabolism and microbial metabolism in diverse environments. After comparing and annotating the functions of proteins of the exudate, it was speculated that the exudate was involved in the construction and remodeling of the fungal cell wall. Pathogenicity, sporulation, and antioxidant effects might all be affected by the exudate. MDPI 2021-03-18 /pmc/articles/PMC8003167/ /pubmed/33803797 http://dx.doi.org/10.3390/pathogens10030364 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ).
spellingShingle Article
Wang, Haining
Yang, Xiaohe
Wei, Songhong
Wang, Yan
Proteomic Analysis of Mycelial Exudates of Ustilaginoidea virens
title Proteomic Analysis of Mycelial Exudates of Ustilaginoidea virens
title_full Proteomic Analysis of Mycelial Exudates of Ustilaginoidea virens
title_fullStr Proteomic Analysis of Mycelial Exudates of Ustilaginoidea virens
title_full_unstemmed Proteomic Analysis of Mycelial Exudates of Ustilaginoidea virens
title_short Proteomic Analysis of Mycelial Exudates of Ustilaginoidea virens
title_sort proteomic analysis of mycelial exudates of ustilaginoidea virens
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8003167/
https://www.ncbi.nlm.nih.gov/pubmed/33803797
http://dx.doi.org/10.3390/pathogens10030364
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