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Pantoea Bacteriophage vB_PagS_AAS23: A Singleton of the Genus Sauletekiovirus
A cold-adapted siphovirus, vB_PagS_AAS23 (AAS23) was isolated in Lithuania using the Pantoea agglomerans strain AUR for the phage propagation. The double-stranded DNA genome of AAS23 (51,170 bp) contains 92 probable protein encoding genes, and no genes for tRNA. A comparative sequence analysis revea...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8004638/ https://www.ncbi.nlm.nih.gov/pubmed/33807116 http://dx.doi.org/10.3390/microorganisms9030668 |
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author | Žukauskienė, Emilija Šimoliūnienė, Monika Truncaitė, Lidija Skapas, Martynas Kaupinis, Algirdas Valius, Mindaugas Meškys, Rolandas Šimoliūnas, Eugenijus |
author_facet | Žukauskienė, Emilija Šimoliūnienė, Monika Truncaitė, Lidija Skapas, Martynas Kaupinis, Algirdas Valius, Mindaugas Meškys, Rolandas Šimoliūnas, Eugenijus |
author_sort | Žukauskienė, Emilija |
collection | PubMed |
description | A cold-adapted siphovirus, vB_PagS_AAS23 (AAS23) was isolated in Lithuania using the Pantoea agglomerans strain AUR for the phage propagation. The double-stranded DNA genome of AAS23 (51,170 bp) contains 92 probable protein encoding genes, and no genes for tRNA. A comparative sequence analysis revealed that 25 of all AAS23 open reading frames (ORFs) code for unique proteins that have no reliable identity to database entries. Based on the phylogenetic analysis, AAS23 has no close relationship to other viruses publicly available to date and represents a single species of the genus Sauletekiovirus within the family Drexlerviridae. The phage is able to form plaques in bacterial lawns even at 4 °C and demonstrates a depolymerase activity. Thus, the data presented in this study not only provides the information on Pantoea-infecting bacteriophages, but also offers novel insights into the diversity of cold-adapted viruses and their potential to be used as biocontrol agents. |
format | Online Article Text |
id | pubmed-8004638 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-80046382021-03-29 Pantoea Bacteriophage vB_PagS_AAS23: A Singleton of the Genus Sauletekiovirus Žukauskienė, Emilija Šimoliūnienė, Monika Truncaitė, Lidija Skapas, Martynas Kaupinis, Algirdas Valius, Mindaugas Meškys, Rolandas Šimoliūnas, Eugenijus Microorganisms Article A cold-adapted siphovirus, vB_PagS_AAS23 (AAS23) was isolated in Lithuania using the Pantoea agglomerans strain AUR for the phage propagation. The double-stranded DNA genome of AAS23 (51,170 bp) contains 92 probable protein encoding genes, and no genes for tRNA. A comparative sequence analysis revealed that 25 of all AAS23 open reading frames (ORFs) code for unique proteins that have no reliable identity to database entries. Based on the phylogenetic analysis, AAS23 has no close relationship to other viruses publicly available to date and represents a single species of the genus Sauletekiovirus within the family Drexlerviridae. The phage is able to form plaques in bacterial lawns even at 4 °C and demonstrates a depolymerase activity. Thus, the data presented in this study not only provides the information on Pantoea-infecting bacteriophages, but also offers novel insights into the diversity of cold-adapted viruses and their potential to be used as biocontrol agents. MDPI 2021-03-23 /pmc/articles/PMC8004638/ /pubmed/33807116 http://dx.doi.org/10.3390/microorganisms9030668 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ). |
spellingShingle | Article Žukauskienė, Emilija Šimoliūnienė, Monika Truncaitė, Lidija Skapas, Martynas Kaupinis, Algirdas Valius, Mindaugas Meškys, Rolandas Šimoliūnas, Eugenijus Pantoea Bacteriophage vB_PagS_AAS23: A Singleton of the Genus Sauletekiovirus |
title | Pantoea Bacteriophage vB_PagS_AAS23: A Singleton of the Genus Sauletekiovirus |
title_full | Pantoea Bacteriophage vB_PagS_AAS23: A Singleton of the Genus Sauletekiovirus |
title_fullStr | Pantoea Bacteriophage vB_PagS_AAS23: A Singleton of the Genus Sauletekiovirus |
title_full_unstemmed | Pantoea Bacteriophage vB_PagS_AAS23: A Singleton of the Genus Sauletekiovirus |
title_short | Pantoea Bacteriophage vB_PagS_AAS23: A Singleton of the Genus Sauletekiovirus |
title_sort | pantoea bacteriophage vb_pags_aas23: a singleton of the genus sauletekiovirus |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8004638/ https://www.ncbi.nlm.nih.gov/pubmed/33807116 http://dx.doi.org/10.3390/microorganisms9030668 |
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