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Federated deep learning for detecting COVID-19 lung abnormalities in CT: a privacy-preserving multinational validation study

Data privacy mechanisms are essential for rapidly scaling medical training databases to capture the heterogeneity of patient data distributions toward robust and generalizable machine learning systems. In the current COVID-19 pandemic, a major focus of artificial intelligence (AI) is interpreting ch...

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Autores principales: Dou, Qi, So, Tiffany Y., Jiang, Meirui, Liu, Quande, Vardhanabhuti, Varut, Kaissis, Georgios, Li, Zeju, Si, Weixin, Lee, Heather H. C., Yu, Kevin, Feng, Zuxin, Dong, Li, Burian, Egon, Jungmann, Friederike, Braren, Rickmer, Makowski, Marcus, Kainz, Bernhard, Rueckert, Daniel, Glocker, Ben, Yu, Simon C. H., Heng, Pheng Ann
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8007806/
https://www.ncbi.nlm.nih.gov/pubmed/33782526
http://dx.doi.org/10.1038/s41746-021-00431-6
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author Dou, Qi
So, Tiffany Y.
Jiang, Meirui
Liu, Quande
Vardhanabhuti, Varut
Kaissis, Georgios
Li, Zeju
Si, Weixin
Lee, Heather H. C.
Yu, Kevin
Feng, Zuxin
Dong, Li
Burian, Egon
Jungmann, Friederike
Braren, Rickmer
Makowski, Marcus
Kainz, Bernhard
Rueckert, Daniel
Glocker, Ben
Yu, Simon C. H.
Heng, Pheng Ann
author_facet Dou, Qi
So, Tiffany Y.
Jiang, Meirui
Liu, Quande
Vardhanabhuti, Varut
Kaissis, Georgios
Li, Zeju
Si, Weixin
Lee, Heather H. C.
Yu, Kevin
Feng, Zuxin
Dong, Li
Burian, Egon
Jungmann, Friederike
Braren, Rickmer
Makowski, Marcus
Kainz, Bernhard
Rueckert, Daniel
Glocker, Ben
Yu, Simon C. H.
Heng, Pheng Ann
author_sort Dou, Qi
collection PubMed
description Data privacy mechanisms are essential for rapidly scaling medical training databases to capture the heterogeneity of patient data distributions toward robust and generalizable machine learning systems. In the current COVID-19 pandemic, a major focus of artificial intelligence (AI) is interpreting chest CT, which can be readily used in the assessment and management of the disease. This paper demonstrates the feasibility of a federated learning method for detecting COVID-19 related CT abnormalities with external validation on patients from a multinational study. We recruited 132 patients from seven multinational different centers, with three internal hospitals from Hong Kong for training and testing, and four external, independent datasets from Mainland China and Germany, for validating model generalizability. We also conducted case studies on longitudinal scans for automated estimation of lesion burden for hospitalized COVID-19 patients. We explore the federated learning algorithms to develop a privacy-preserving AI model for COVID-19 medical image diagnosis with good generalization capability on unseen multinational datasets. Federated learning could provide an effective mechanism during pandemics to rapidly develop clinically useful AI across institutions and countries overcoming the burden of central aggregation of large amounts of sensitive data.
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spelling pubmed-80078062021-04-16 Federated deep learning for detecting COVID-19 lung abnormalities in CT: a privacy-preserving multinational validation study Dou, Qi So, Tiffany Y. Jiang, Meirui Liu, Quande Vardhanabhuti, Varut Kaissis, Georgios Li, Zeju Si, Weixin Lee, Heather H. C. Yu, Kevin Feng, Zuxin Dong, Li Burian, Egon Jungmann, Friederike Braren, Rickmer Makowski, Marcus Kainz, Bernhard Rueckert, Daniel Glocker, Ben Yu, Simon C. H. Heng, Pheng Ann NPJ Digit Med Article Data privacy mechanisms are essential for rapidly scaling medical training databases to capture the heterogeneity of patient data distributions toward robust and generalizable machine learning systems. In the current COVID-19 pandemic, a major focus of artificial intelligence (AI) is interpreting chest CT, which can be readily used in the assessment and management of the disease. This paper demonstrates the feasibility of a federated learning method for detecting COVID-19 related CT abnormalities with external validation on patients from a multinational study. We recruited 132 patients from seven multinational different centers, with three internal hospitals from Hong Kong for training and testing, and four external, independent datasets from Mainland China and Germany, for validating model generalizability. We also conducted case studies on longitudinal scans for automated estimation of lesion burden for hospitalized COVID-19 patients. We explore the federated learning algorithms to develop a privacy-preserving AI model for COVID-19 medical image diagnosis with good generalization capability on unseen multinational datasets. Federated learning could provide an effective mechanism during pandemics to rapidly develop clinically useful AI across institutions and countries overcoming the burden of central aggregation of large amounts of sensitive data. Nature Publishing Group UK 2021-03-29 /pmc/articles/PMC8007806/ /pubmed/33782526 http://dx.doi.org/10.1038/s41746-021-00431-6 Text en © The Author(s) 2021, corrected publication 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Dou, Qi
So, Tiffany Y.
Jiang, Meirui
Liu, Quande
Vardhanabhuti, Varut
Kaissis, Georgios
Li, Zeju
Si, Weixin
Lee, Heather H. C.
Yu, Kevin
Feng, Zuxin
Dong, Li
Burian, Egon
Jungmann, Friederike
Braren, Rickmer
Makowski, Marcus
Kainz, Bernhard
Rueckert, Daniel
Glocker, Ben
Yu, Simon C. H.
Heng, Pheng Ann
Federated deep learning for detecting COVID-19 lung abnormalities in CT: a privacy-preserving multinational validation study
title Federated deep learning for detecting COVID-19 lung abnormalities in CT: a privacy-preserving multinational validation study
title_full Federated deep learning for detecting COVID-19 lung abnormalities in CT: a privacy-preserving multinational validation study
title_fullStr Federated deep learning for detecting COVID-19 lung abnormalities in CT: a privacy-preserving multinational validation study
title_full_unstemmed Federated deep learning for detecting COVID-19 lung abnormalities in CT: a privacy-preserving multinational validation study
title_short Federated deep learning for detecting COVID-19 lung abnormalities in CT: a privacy-preserving multinational validation study
title_sort federated deep learning for detecting covid-19 lung abnormalities in ct: a privacy-preserving multinational validation study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8007806/
https://www.ncbi.nlm.nih.gov/pubmed/33782526
http://dx.doi.org/10.1038/s41746-021-00431-6
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