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Fpemlocal: Estimating family planning indicators in R for a single population of interest
The global Family Planning Estimation model (FPEM) combines a Bayesian hierarchical model with country-specific time trends to yield estimates of contraceptive prevalence and unmet need for family planning for countries worldwide. In this paper, we introduce the R package fpemlocal that carries out...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
F1000 Research Limited
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8008158/ https://www.ncbi.nlm.nih.gov/pubmed/33842844 http://dx.doi.org/10.12688/gatesopenres.13211.1 |
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author | Guranich, Gregory Cahill, Niamh Alkema, Leontine |
author_facet | Guranich, Gregory Cahill, Niamh Alkema, Leontine |
author_sort | Guranich, Gregory |
collection | PubMed |
description | The global Family Planning Estimation model (FPEM) combines a Bayesian hierarchical model with country-specific time trends to yield estimates of contraceptive prevalence and unmet need for family planning for countries worldwide. In this paper, we introduce the R package fpemlocal that carries out the estimation of family planning indicators for a single population, for example, for a single country or smaller area. In this implementation of FPEM, all non-population-specific parameters are fixed at outcomes obtained in a prior global FPEM run. The development of this model was motivated by the demand for computational efficiency, without loss of model accuracy, when estimates and projections from FPEM were needed only for a single country. We present use cases to produce estimates for a single population of women by union status or all women based on package-provided data bases and user-specified data. We also explain how to aggregate estimates across multiple populations. The R package forms the basis of the Track20 Family Planning Estimation Tool to monitor trends in family planning indicators for the FP2020 initiative. Fpemlocal is available from: https://github.com/AlkemaLab/fpemlocal |
format | Online Article Text |
id | pubmed-8008158 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | F1000 Research Limited |
record_format | MEDLINE/PubMed |
spelling | pubmed-80081582021-04-08 Fpemlocal: Estimating family planning indicators in R for a single population of interest Guranich, Gregory Cahill, Niamh Alkema, Leontine Gates Open Res Software Tool Article The global Family Planning Estimation model (FPEM) combines a Bayesian hierarchical model with country-specific time trends to yield estimates of contraceptive prevalence and unmet need for family planning for countries worldwide. In this paper, we introduce the R package fpemlocal that carries out the estimation of family planning indicators for a single population, for example, for a single country or smaller area. In this implementation of FPEM, all non-population-specific parameters are fixed at outcomes obtained in a prior global FPEM run. The development of this model was motivated by the demand for computational efficiency, without loss of model accuracy, when estimates and projections from FPEM were needed only for a single country. We present use cases to produce estimates for a single population of women by union status or all women based on package-provided data bases and user-specified data. We also explain how to aggregate estimates across multiple populations. The R package forms the basis of the Track20 Family Planning Estimation Tool to monitor trends in family planning indicators for the FP2020 initiative. Fpemlocal is available from: https://github.com/AlkemaLab/fpemlocal F1000 Research Limited 2021-02-24 /pmc/articles/PMC8008158/ /pubmed/33842844 http://dx.doi.org/10.12688/gatesopenres.13211.1 Text en Copyright: © 2021 Guranich G et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Software Tool Article Guranich, Gregory Cahill, Niamh Alkema, Leontine Fpemlocal: Estimating family planning indicators in R for a single population of interest |
title |
Fpemlocal: Estimating family planning indicators in R for a single population of interest |
title_full |
Fpemlocal: Estimating family planning indicators in R for a single population of interest |
title_fullStr |
Fpemlocal: Estimating family planning indicators in R for a single population of interest |
title_full_unstemmed |
Fpemlocal: Estimating family planning indicators in R for a single population of interest |
title_short |
Fpemlocal: Estimating family planning indicators in R for a single population of interest |
title_sort | fpemlocal: estimating family planning indicators in r for a single population of interest |
topic | Software Tool Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8008158/ https://www.ncbi.nlm.nih.gov/pubmed/33842844 http://dx.doi.org/10.12688/gatesopenres.13211.1 |
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