The complete chloroplast genome sequences of Dolichandrone spathacea (L. F.) K. Schum., a semi-mangrove plant

Dolichandrone spathacea(L. F.) K. Schum. is an excellent tree species for coastal protection forests. In this study, the complete chloroplast genome sequence of D. spathacea was obtained through high-throughput sequencing. The length of chloroplast genome was 159,156 bp in length, containing a large...

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Autores principales: Yu, Ting, Ren, Si-Yu, Wang, Xin-Rui, Xu, Li, Xu, Jiu-Heng, Ding, Gong-Tao, Tang, Li-Ming, Zhang, Dong-Xu, Guan, Wen-Bin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8008931/
https://www.ncbi.nlm.nih.gov/pubmed/33829081
http://dx.doi.org/10.1080/23802359.2021.1901619
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author Yu, Ting
Ren, Si-Yu
Wang, Xin-Rui
Xu, Li
Xu, Jiu-Heng
Ding, Gong-Tao
Tang, Li-Ming
Zhang, Dong-Xu
Guan, Wen-Bin
author_facet Yu, Ting
Ren, Si-Yu
Wang, Xin-Rui
Xu, Li
Xu, Jiu-Heng
Ding, Gong-Tao
Tang, Li-Ming
Zhang, Dong-Xu
Guan, Wen-Bin
author_sort Yu, Ting
collection PubMed
description Dolichandrone spathacea(L. F.) K. Schum. is an excellent tree species for coastal protection forests. In this study, the complete chloroplast genome sequence of D. spathacea was obtained through high-throughput sequencing. The length of chloroplast genome was 159,156 bp in length, containing a large single-copy region (LSC) of 86,053 bp, a small single-copy region (SSC) of 12,635 bp, and a pair of inverted repeats (IRa and IRb) regions of 30,234 bp. The chloroplast genome with 37.95% GC content, contained 134 genes, including 90 protein-coding genes, 8 rRNA genes, and 36 tRNA genes. Phylogenetic analysis with the reported chloroplast sequences shows that D. spathacea is more closely related to Spathodea campanulata.
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spelling pubmed-80089312021-04-06 The complete chloroplast genome sequences of Dolichandrone spathacea (L. F.) K. Schum., a semi-mangrove plant Yu, Ting Ren, Si-Yu Wang, Xin-Rui Xu, Li Xu, Jiu-Heng Ding, Gong-Tao Tang, Li-Ming Zhang, Dong-Xu Guan, Wen-Bin Mitochondrial DNA B Resour Mitogenome Announcement Dolichandrone spathacea(L. F.) K. Schum. is an excellent tree species for coastal protection forests. In this study, the complete chloroplast genome sequence of D. spathacea was obtained through high-throughput sequencing. The length of chloroplast genome was 159,156 bp in length, containing a large single-copy region (LSC) of 86,053 bp, a small single-copy region (SSC) of 12,635 bp, and a pair of inverted repeats (IRa and IRb) regions of 30,234 bp. The chloroplast genome with 37.95% GC content, contained 134 genes, including 90 protein-coding genes, 8 rRNA genes, and 36 tRNA genes. Phylogenetic analysis with the reported chloroplast sequences shows that D. spathacea is more closely related to Spathodea campanulata. Taylor & Francis 2021-03-26 /pmc/articles/PMC8008931/ /pubmed/33829081 http://dx.doi.org/10.1080/23802359.2021.1901619 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yu, Ting
Ren, Si-Yu
Wang, Xin-Rui
Xu, Li
Xu, Jiu-Heng
Ding, Gong-Tao
Tang, Li-Ming
Zhang, Dong-Xu
Guan, Wen-Bin
The complete chloroplast genome sequences of Dolichandrone spathacea (L. F.) K. Schum., a semi-mangrove plant
title The complete chloroplast genome sequences of Dolichandrone spathacea (L. F.) K. Schum., a semi-mangrove plant
title_full The complete chloroplast genome sequences of Dolichandrone spathacea (L. F.) K. Schum., a semi-mangrove plant
title_fullStr The complete chloroplast genome sequences of Dolichandrone spathacea (L. F.) K. Schum., a semi-mangrove plant
title_full_unstemmed The complete chloroplast genome sequences of Dolichandrone spathacea (L. F.) K. Schum., a semi-mangrove plant
title_short The complete chloroplast genome sequences of Dolichandrone spathacea (L. F.) K. Schum., a semi-mangrove plant
title_sort complete chloroplast genome sequences of dolichandrone spathacea (l. f.) k. schum., a semi-mangrove plant
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8008931/
https://www.ncbi.nlm.nih.gov/pubmed/33829081
http://dx.doi.org/10.1080/23802359.2021.1901619
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