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The complete chloroplast genome of Castanea sativa Mill. (Fagaceae)

Castanea sativa Mill. is mainly grown in the temperate regions of continental Europe, and it has a considerable economic value. In this study, the complete chloroplast genome sequence of Castanea sativa was characterized. Leaves were collected from the National Botanical Garden of Latvia. The chloro...

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Autores principales: Zhu, Cancan, Zhang, Shijie, Bai, Xiaoqian, Guan, Fuqin, Chen, Yu, Zhao, Yuqiang, Li, Mimi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8009113/
https://www.ncbi.nlm.nih.gov/pubmed/33829098
http://dx.doi.org/10.1080/23802359.2021.1903359
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author Zhu, Cancan
Zhang, Shijie
Bai, Xiaoqian
Guan, Fuqin
Chen, Yu
Zhao, Yuqiang
Li, Mimi
author_facet Zhu, Cancan
Zhang, Shijie
Bai, Xiaoqian
Guan, Fuqin
Chen, Yu
Zhao, Yuqiang
Li, Mimi
author_sort Zhu, Cancan
collection PubMed
description Castanea sativa Mill. is mainly grown in the temperate regions of continental Europe, and it has a considerable economic value. In this study, the complete chloroplast genome sequence of Castanea sativa was characterized. Leaves were collected from the National Botanical Garden of Latvia. The chloroplast genome was determined to be 160,938 bp in length. It contained large single-copy (LSC) and small single-copy (SSC) regions of 90,519 and 18,967 bp, respectively, which were separated by a pair of 25,726 bp inverted repeat (IR) regions. The genome is predicted to contain 130 genes, including 83 protein-coding genes, 37 tRNA genes, eight rRNA genes, and two pseudo genes. The overall GC content of the genome is 36.8%. A phylogenetic tree reconstructed by 34 chloroplast genomes reveals that C. sativa is most closely related to the clade including C. henryi, C. seguinii and C. mollissima.
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spelling pubmed-80091132021-04-06 The complete chloroplast genome of Castanea sativa Mill. (Fagaceae) Zhu, Cancan Zhang, Shijie Bai, Xiaoqian Guan, Fuqin Chen, Yu Zhao, Yuqiang Li, Mimi Mitochondrial DNA B Resour Mitogenome Announcement Castanea sativa Mill. is mainly grown in the temperate regions of continental Europe, and it has a considerable economic value. In this study, the complete chloroplast genome sequence of Castanea sativa was characterized. Leaves were collected from the National Botanical Garden of Latvia. The chloroplast genome was determined to be 160,938 bp in length. It contained large single-copy (LSC) and small single-copy (SSC) regions of 90,519 and 18,967 bp, respectively, which were separated by a pair of 25,726 bp inverted repeat (IR) regions. The genome is predicted to contain 130 genes, including 83 protein-coding genes, 37 tRNA genes, eight rRNA genes, and two pseudo genes. The overall GC content of the genome is 36.8%. A phylogenetic tree reconstructed by 34 chloroplast genomes reveals that C. sativa is most closely related to the clade including C. henryi, C. seguinii and C. mollissima. Taylor & Francis 2021-03-28 /pmc/articles/PMC8009113/ /pubmed/33829098 http://dx.doi.org/10.1080/23802359.2021.1903359 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhu, Cancan
Zhang, Shijie
Bai, Xiaoqian
Guan, Fuqin
Chen, Yu
Zhao, Yuqiang
Li, Mimi
The complete chloroplast genome of Castanea sativa Mill. (Fagaceae)
title The complete chloroplast genome of Castanea sativa Mill. (Fagaceae)
title_full The complete chloroplast genome of Castanea sativa Mill. (Fagaceae)
title_fullStr The complete chloroplast genome of Castanea sativa Mill. (Fagaceae)
title_full_unstemmed The complete chloroplast genome of Castanea sativa Mill. (Fagaceae)
title_short The complete chloroplast genome of Castanea sativa Mill. (Fagaceae)
title_sort complete chloroplast genome of castanea sativa mill. (fagaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8009113/
https://www.ncbi.nlm.nih.gov/pubmed/33829098
http://dx.doi.org/10.1080/23802359.2021.1903359
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