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Incorporating Information on Control Diseases Across Space and Time to Improve Estimation of the Population-level Impact of Vaccines

The synthetic control method evaluates the impact of vaccines while adjusting for a set of control time series representing diseases that are unaffected by the vaccine. However, noise in control time series, particularly in areas with small counts, can obscure the association with the outcome, preve...

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Autores principales: Shioda, Kayoko, Cai, Jiachen, Warren, Joshua L., Weinberger, Daniel M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Lippincott Williams & Wilkins 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8011507/
https://www.ncbi.nlm.nih.gov/pubmed/33783394
http://dx.doi.org/10.1097/EDE.0000000000001341
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author Shioda, Kayoko
Cai, Jiachen
Warren, Joshua L.
Weinberger, Daniel M.
author_facet Shioda, Kayoko
Cai, Jiachen
Warren, Joshua L.
Weinberger, Daniel M.
author_sort Shioda, Kayoko
collection PubMed
description The synthetic control method evaluates the impact of vaccines while adjusting for a set of control time series representing diseases that are unaffected by the vaccine. However, noise in control time series, particularly in areas with small counts, can obscure the association with the outcome, preventing proper adjustments. To overcome this issue, we investigated the use of temporal and spatial aggregation methods to smooth the controls and allow for adjustment of underlying trends. METHODS: We evaluated the impact of pneumococcal conjugate vaccine on all-cause pneumonia hospitalizations among adults ≥80 years of age in 25 states in Brazil from 2005 to 2015. Pneumonia hospitalizations in this group indicated a strong increasing secular trend over time that may influence estimation of the vaccine impact. First, we aggregated control time series separately by time or space before incorporation into the synthetic control model. Next, we developed distributed lags models (DLMs) to automatically determine what level of aggregation was most appropriate for each control. RESULTS: The aggregation of control time series enabled the synthetic control model to identify stronger associations between outcome and controls. As a result, the aggregation models and DLMs succeeded in adjusting for long-term trends even in smaller states with sparse data, leading to more reliable estimates of vaccine impact. CONCLUSIONS: When synthetic control struggles to identify important prevaccine associations due to noise in control time series, users can aggregate controls over time or space to generate more robust estimates of the vaccine impact. DLMs automate this process without requiring prespecification of the aggregation level.
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spelling pubmed-80115072021-04-02 Incorporating Information on Control Diseases Across Space and Time to Improve Estimation of the Population-level Impact of Vaccines Shioda, Kayoko Cai, Jiachen Warren, Joshua L. Weinberger, Daniel M. Epidemiology Infectious Diseases The synthetic control method evaluates the impact of vaccines while adjusting for a set of control time series representing diseases that are unaffected by the vaccine. However, noise in control time series, particularly in areas with small counts, can obscure the association with the outcome, preventing proper adjustments. To overcome this issue, we investigated the use of temporal and spatial aggregation methods to smooth the controls and allow for adjustment of underlying trends. METHODS: We evaluated the impact of pneumococcal conjugate vaccine on all-cause pneumonia hospitalizations among adults ≥80 years of age in 25 states in Brazil from 2005 to 2015. Pneumonia hospitalizations in this group indicated a strong increasing secular trend over time that may influence estimation of the vaccine impact. First, we aggregated control time series separately by time or space before incorporation into the synthetic control model. Next, we developed distributed lags models (DLMs) to automatically determine what level of aggregation was most appropriate for each control. RESULTS: The aggregation of control time series enabled the synthetic control model to identify stronger associations between outcome and controls. As a result, the aggregation models and DLMs succeeded in adjusting for long-term trends even in smaller states with sparse data, leading to more reliable estimates of vaccine impact. CONCLUSIONS: When synthetic control struggles to identify important prevaccine associations due to noise in control time series, users can aggregate controls over time or space to generate more robust estimates of the vaccine impact. DLMs automate this process without requiring prespecification of the aggregation level. Lippincott Williams & Wilkins 2021-03-12 2021-05 /pmc/articles/PMC8011507/ /pubmed/33783394 http://dx.doi.org/10.1097/EDE.0000000000001341 Text en Copyright © 2021 The Author(s). Published by Wolters Kluwer Health, Inc. This is an open access article distributed under the Creative Commons Attribution License 4.0 (CCBY) (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Infectious Diseases
Shioda, Kayoko
Cai, Jiachen
Warren, Joshua L.
Weinberger, Daniel M.
Incorporating Information on Control Diseases Across Space and Time to Improve Estimation of the Population-level Impact of Vaccines
title Incorporating Information on Control Diseases Across Space and Time to Improve Estimation of the Population-level Impact of Vaccines
title_full Incorporating Information on Control Diseases Across Space and Time to Improve Estimation of the Population-level Impact of Vaccines
title_fullStr Incorporating Information on Control Diseases Across Space and Time to Improve Estimation of the Population-level Impact of Vaccines
title_full_unstemmed Incorporating Information on Control Diseases Across Space and Time to Improve Estimation of the Population-level Impact of Vaccines
title_short Incorporating Information on Control Diseases Across Space and Time to Improve Estimation of the Population-level Impact of Vaccines
title_sort incorporating information on control diseases across space and time to improve estimation of the population-level impact of vaccines
topic Infectious Diseases
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8011507/
https://www.ncbi.nlm.nih.gov/pubmed/33783394
http://dx.doi.org/10.1097/EDE.0000000000001341
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