Cargando…
Isoelectric point determination by imaged CIEF of commercially available SARS‐CoV‐2 proteins and the hACE2 receptor
In order to contribute to the scientific research on the severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2), we have investigated the isoelectric points (pI) of several related proteins, which are commercially available: the receptor‐binding domain (RBD) with His‐ and Fc‐tag, the S1 subuni...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8013610/ https://www.ncbi.nlm.nih.gov/pubmed/33533060 http://dx.doi.org/10.1002/elps.202100015 |
_version_ | 1783673500813230080 |
---|---|
author | Krebs, Finja Scheller, Christin Grove‐Heike, Kristina Pohl, Lena Wätzig, Hermann |
author_facet | Krebs, Finja Scheller, Christin Grove‐Heike, Kristina Pohl, Lena Wätzig, Hermann |
author_sort | Krebs, Finja |
collection | PubMed |
description | In order to contribute to the scientific research on the severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2), we have investigated the isoelectric points (pI) of several related proteins, which are commercially available: the receptor‐binding domain (RBD) with His‐ and Fc‐tag, the S1 subunit with His‐tag, the S1/S2 subunits with His‐tag and the human angiotensin‐converting enzyme 2 (hACE2) with His‐tag. First, the theoretical pI values, based on the amino acid (AA) sequences of the proteins, were calculated using the ProtParam tool from the Bioinformatics Resource Portal ExPASy. The proteins were then measured with the Maurice imaged CIEF system (native fluorescence detection), testing various measurement conditions, such as different ampholytes or ampholyte mixtures. Due to isoforms, we get sections with several peaks and not just one peak for each protein. The determined pI range for the RBD/Fc is 8.24–9.32 (theoretical pI: 8.55), for the RBD/His it is 7.36–9.88 (8.91) and for the S1/His it is 7.30–8.37 (7.80). The pI range of the S1/S2/His is 4.41–5.87 (no theoretical pI, AA sequence unknown) and for hACE2/His, the determined global range is 5.19–6.11 (5.60) for all experimental conditions chosen. All theoretically derived values were found within these ranges, usually close to the center. Therefore, we consider theoretical values as useful to make predictions about the isoelectric points of SARS‐CoV‐2 proteins. The experimental conditions had only a minor influence on the pI ranges obtained and mainly influenced the peak shapes. |
format | Online Article Text |
id | pubmed-8013610 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-80136102021-04-01 Isoelectric point determination by imaged CIEF of commercially available SARS‐CoV‐2 proteins and the hACE2 receptor Krebs, Finja Scheller, Christin Grove‐Heike, Kristina Pohl, Lena Wätzig, Hermann Electrophoresis Fast Track In order to contribute to the scientific research on the severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2), we have investigated the isoelectric points (pI) of several related proteins, which are commercially available: the receptor‐binding domain (RBD) with His‐ and Fc‐tag, the S1 subunit with His‐tag, the S1/S2 subunits with His‐tag and the human angiotensin‐converting enzyme 2 (hACE2) with His‐tag. First, the theoretical pI values, based on the amino acid (AA) sequences of the proteins, were calculated using the ProtParam tool from the Bioinformatics Resource Portal ExPASy. The proteins were then measured with the Maurice imaged CIEF system (native fluorescence detection), testing various measurement conditions, such as different ampholytes or ampholyte mixtures. Due to isoforms, we get sections with several peaks and not just one peak for each protein. The determined pI range for the RBD/Fc is 8.24–9.32 (theoretical pI: 8.55), for the RBD/His it is 7.36–9.88 (8.91) and for the S1/His it is 7.30–8.37 (7.80). The pI range of the S1/S2/His is 4.41–5.87 (no theoretical pI, AA sequence unknown) and for hACE2/His, the determined global range is 5.19–6.11 (5.60) for all experimental conditions chosen. All theoretically derived values were found within these ranges, usually close to the center. Therefore, we consider theoretical values as useful to make predictions about the isoelectric points of SARS‐CoV‐2 proteins. The experimental conditions had only a minor influence on the pI ranges obtained and mainly influenced the peak shapes. John Wiley and Sons Inc. 2021-02-12 2021-03 /pmc/articles/PMC8013610/ /pubmed/33533060 http://dx.doi.org/10.1002/elps.202100015 Text en © 2021 The Authors. Electrophoresis published by Wiley‐VCH GmbH This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Fast Track Krebs, Finja Scheller, Christin Grove‐Heike, Kristina Pohl, Lena Wätzig, Hermann Isoelectric point determination by imaged CIEF of commercially available SARS‐CoV‐2 proteins and the hACE2 receptor |
title | Isoelectric point determination by imaged CIEF of commercially available SARS‐CoV‐2 proteins and the hACE2 receptor |
title_full | Isoelectric point determination by imaged CIEF of commercially available SARS‐CoV‐2 proteins and the hACE2 receptor |
title_fullStr | Isoelectric point determination by imaged CIEF of commercially available SARS‐CoV‐2 proteins and the hACE2 receptor |
title_full_unstemmed | Isoelectric point determination by imaged CIEF of commercially available SARS‐CoV‐2 proteins and the hACE2 receptor |
title_short | Isoelectric point determination by imaged CIEF of commercially available SARS‐CoV‐2 proteins and the hACE2 receptor |
title_sort | isoelectric point determination by imaged cief of commercially available sars‐cov‐2 proteins and the hace2 receptor |
topic | Fast Track |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8013610/ https://www.ncbi.nlm.nih.gov/pubmed/33533060 http://dx.doi.org/10.1002/elps.202100015 |
work_keys_str_mv | AT krebsfinja isoelectricpointdeterminationbyimagedciefofcommerciallyavailablesarscov2proteinsandthehace2receptor AT schellerchristin isoelectricpointdeterminationbyimagedciefofcommerciallyavailablesarscov2proteinsandthehace2receptor AT groveheikekristina isoelectricpointdeterminationbyimagedciefofcommerciallyavailablesarscov2proteinsandthehace2receptor AT pohllena isoelectricpointdeterminationbyimagedciefofcommerciallyavailablesarscov2proteinsandthehace2receptor AT watzighermann isoelectricpointdeterminationbyimagedciefofcommerciallyavailablesarscov2proteinsandthehace2receptor |