The complete chloroplast genome of Chimonobambusa hejiangensis (Poaceae: Arundinarieae) and phylogenetic analysis

Chimonobambusa hejiangensis is a kind of bamboo that has excellent edible and economic value, which is endemic to southwest China. The study used next-generation sequencing to obtain the complete chloroplast (cp) genome sequence of C. hejiangensis. The cp genome of C. hejiangensis has a total length...

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Autores principales: Liu, Yanjiang, Su, Ting, Peng, MaiMai, Li, Jiaxue, Zhu, Xiao, Gou, Guangqian, Dai, Zhaoxia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8018436/
https://www.ncbi.nlm.nih.gov/pubmed/33855178
http://dx.doi.org/10.1080/23802359.2021.1886007
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author Liu, Yanjiang
Su, Ting
Peng, MaiMai
Li, Jiaxue
Zhu, Xiao
Gou, Guangqian
Dai, Zhaoxia
author_facet Liu, Yanjiang
Su, Ting
Peng, MaiMai
Li, Jiaxue
Zhu, Xiao
Gou, Guangqian
Dai, Zhaoxia
author_sort Liu, Yanjiang
collection PubMed
description Chimonobambusa hejiangensis is a kind of bamboo that has excellent edible and economic value, which is endemic to southwest China. The study used next-generation sequencing to obtain the complete chloroplast (cp) genome sequence of C. hejiangensis. The cp genome of C. hejiangensis has a total length of 138,908 bp, and consisted of an 82,495-bp large single-copy region, an 12,743-bp small single-copy region, and two 21,835-bp IR regions. In total, 112 unique genes were found in the cp genome, including 77 protein coding, 31 tRNA, and 4 rRNA genes. Phylogenetic analysis indicated that C.hejiangensis and C. tumidissinoda are sister species within the Arundinarieae genus, where Chimonocalamus and Ampelocalamus are more closely related to them.
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spelling pubmed-80184362021-04-13 The complete chloroplast genome of Chimonobambusa hejiangensis (Poaceae: Arundinarieae) and phylogenetic analysis Liu, Yanjiang Su, Ting Peng, MaiMai Li, Jiaxue Zhu, Xiao Gou, Guangqian Dai, Zhaoxia Mitochondrial DNA B Resour Mitogenome Announcement Chimonobambusa hejiangensis is a kind of bamboo that has excellent edible and economic value, which is endemic to southwest China. The study used next-generation sequencing to obtain the complete chloroplast (cp) genome sequence of C. hejiangensis. The cp genome of C. hejiangensis has a total length of 138,908 bp, and consisted of an 82,495-bp large single-copy region, an 12,743-bp small single-copy region, and two 21,835-bp IR regions. In total, 112 unique genes were found in the cp genome, including 77 protein coding, 31 tRNA, and 4 rRNA genes. Phylogenetic analysis indicated that C.hejiangensis and C. tumidissinoda are sister species within the Arundinarieae genus, where Chimonocalamus and Ampelocalamus are more closely related to them. Taylor & Francis 2021-04-01 /pmc/articles/PMC8018436/ /pubmed/33855178 http://dx.doi.org/10.1080/23802359.2021.1886007 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Liu, Yanjiang
Su, Ting
Peng, MaiMai
Li, Jiaxue
Zhu, Xiao
Gou, Guangqian
Dai, Zhaoxia
The complete chloroplast genome of Chimonobambusa hejiangensis (Poaceae: Arundinarieae) and phylogenetic analysis
title The complete chloroplast genome of Chimonobambusa hejiangensis (Poaceae: Arundinarieae) and phylogenetic analysis
title_full The complete chloroplast genome of Chimonobambusa hejiangensis (Poaceae: Arundinarieae) and phylogenetic analysis
title_fullStr The complete chloroplast genome of Chimonobambusa hejiangensis (Poaceae: Arundinarieae) and phylogenetic analysis
title_full_unstemmed The complete chloroplast genome of Chimonobambusa hejiangensis (Poaceae: Arundinarieae) and phylogenetic analysis
title_short The complete chloroplast genome of Chimonobambusa hejiangensis (Poaceae: Arundinarieae) and phylogenetic analysis
title_sort complete chloroplast genome of chimonobambusa hejiangensis (poaceae: arundinarieae) and phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8018436/
https://www.ncbi.nlm.nih.gov/pubmed/33855178
http://dx.doi.org/10.1080/23802359.2021.1886007
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