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Protein in-cell NMR spectroscopy at 1.2 GHz

In-cell NMR spectroscopy provides precious structural and functional information on biological macromolecules in their native cellular environment at atomic resolution. However, the intrinsic low sensitivity of NMR imposes a big limitation in the applicability of the methodology. In this respect, th...

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Autores principales: Luchinat, Enrico, Barbieri, Letizia, Cremonini, Matteo, Banci, Lucia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8018933/
https://www.ncbi.nlm.nih.gov/pubmed/33580357
http://dx.doi.org/10.1007/s10858-021-00358-w
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author Luchinat, Enrico
Barbieri, Letizia
Cremonini, Matteo
Banci, Lucia
author_facet Luchinat, Enrico
Barbieri, Letizia
Cremonini, Matteo
Banci, Lucia
author_sort Luchinat, Enrico
collection PubMed
description In-cell NMR spectroscopy provides precious structural and functional information on biological macromolecules in their native cellular environment at atomic resolution. However, the intrinsic low sensitivity of NMR imposes a big limitation in the applicability of the methodology. In this respect, the recently developed commercial 1.2 GHz NMR spectrometer is expected to introduce significant benefits. However, cell samples may suffer from detrimental effects at ultrahigh fields, that must be carefully evaluated. Here we show the first in-cell NMR spectra recorded at 1.2 GHz on human cells, and we compare resolution and sensitivity against those obtained at 900 and 950 MHz. To evaluate the effects of different spin relaxation rates, SOFAST-HMQC and BEST-TROSY spectra were recorded on intracellular α-synuclein and carbonic anhydrase. Major improvements are observed at 1.2 GHz when analyzing unfolded proteins, such as α-synuclein, while the TROSY scheme improves the resolution for both globular and unfolded proteins. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s10858-021-00358-w.
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spelling pubmed-80189332021-04-16 Protein in-cell NMR spectroscopy at 1.2 GHz Luchinat, Enrico Barbieri, Letizia Cremonini, Matteo Banci, Lucia J Biomol NMR Article In-cell NMR spectroscopy provides precious structural and functional information on biological macromolecules in their native cellular environment at atomic resolution. However, the intrinsic low sensitivity of NMR imposes a big limitation in the applicability of the methodology. In this respect, the recently developed commercial 1.2 GHz NMR spectrometer is expected to introduce significant benefits. However, cell samples may suffer from detrimental effects at ultrahigh fields, that must be carefully evaluated. Here we show the first in-cell NMR spectra recorded at 1.2 GHz on human cells, and we compare resolution and sensitivity against those obtained at 900 and 950 MHz. To evaluate the effects of different spin relaxation rates, SOFAST-HMQC and BEST-TROSY spectra were recorded on intracellular α-synuclein and carbonic anhydrase. Major improvements are observed at 1.2 GHz when analyzing unfolded proteins, such as α-synuclein, while the TROSY scheme improves the resolution for both globular and unfolded proteins. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s10858-021-00358-w. Springer Netherlands 2021-02-12 2021 /pmc/articles/PMC8018933/ /pubmed/33580357 http://dx.doi.org/10.1007/s10858-021-00358-w Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Luchinat, Enrico
Barbieri, Letizia
Cremonini, Matteo
Banci, Lucia
Protein in-cell NMR spectroscopy at 1.2 GHz
title Protein in-cell NMR spectroscopy at 1.2 GHz
title_full Protein in-cell NMR spectroscopy at 1.2 GHz
title_fullStr Protein in-cell NMR spectroscopy at 1.2 GHz
title_full_unstemmed Protein in-cell NMR spectroscopy at 1.2 GHz
title_short Protein in-cell NMR spectroscopy at 1.2 GHz
title_sort protein in-cell nmr spectroscopy at 1.2 ghz
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8018933/
https://www.ncbi.nlm.nih.gov/pubmed/33580357
http://dx.doi.org/10.1007/s10858-021-00358-w
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