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How citizen science could improve species distribution models and their independent assessment

1. Species distribution models (SDM) have been increasingly developed in recent years, but their validity is questioned. Their assessment can be improved by the use of independent data, but this can be difficult to obtain and prohibitive to collect. Standardized data from citizen science may be used...

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Autores principales: Matutini, Florence, Baudry, Jacques, Pain, Guillaume, Sineau, Morgane, Pithon, Joséphine
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8019030/
https://www.ncbi.nlm.nih.gov/pubmed/33841764
http://dx.doi.org/10.1002/ece3.7210
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author Matutini, Florence
Baudry, Jacques
Pain, Guillaume
Sineau, Morgane
Pithon, Joséphine
author_facet Matutini, Florence
Baudry, Jacques
Pain, Guillaume
Sineau, Morgane
Pithon, Joséphine
author_sort Matutini, Florence
collection PubMed
description 1. Species distribution models (SDM) have been increasingly developed in recent years, but their validity is questioned. Their assessment can be improved by the use of independent data, but this can be difficult to obtain and prohibitive to collect. Standardized data from citizen science may be used to establish external evaluation datasets and to improve SDM validation and applicability. 2. We used opportunistic presence‐only data along with presence–absence data from a standardized citizen science program to establish and assess habitat suitability maps for 9 species of amphibian in western France. We assessed Generalized Additive and Random Forest Models’ performance by (1) cross‐validation using 30% of the opportunistic dataset used to calibrate the model or (2) external validation using different independent datasets derived from citizen science monitoring. We tested the effects of applying different combinations of filters to the citizen data and of complementing it with additional standardized fieldwork. 3. Cross‐validation with an internal evaluation dataset resulted in higher AUC (Area Under the receiver operating Curve) than external evaluation causing overestimation of model accuracy and did not select the same models; models integrating sampling effort performed better with external validation. AUC, specificity, and sensitivity of models calculated with different filtered external datasets differed for some species. However, for most species, complementary fieldwork was not necessary to obtain coherent results, as long as the citizen science data were strongly filtered. 4. Since external validation methods using independent data are considered more robust, filtering data from citizen sciences may make a valuable contribution to the assessment of SDM. Limited complementary fieldwork with volunteer's participation to complete ecological gradients may also possibly enhance citizen involvement and lead to better use of SDM in decision processes for nature conservation.
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spelling pubmed-80190302021-04-08 How citizen science could improve species distribution models and their independent assessment Matutini, Florence Baudry, Jacques Pain, Guillaume Sineau, Morgane Pithon, Joséphine Ecol Evol Original Research 1. Species distribution models (SDM) have been increasingly developed in recent years, but their validity is questioned. Their assessment can be improved by the use of independent data, but this can be difficult to obtain and prohibitive to collect. Standardized data from citizen science may be used to establish external evaluation datasets and to improve SDM validation and applicability. 2. We used opportunistic presence‐only data along with presence–absence data from a standardized citizen science program to establish and assess habitat suitability maps for 9 species of amphibian in western France. We assessed Generalized Additive and Random Forest Models’ performance by (1) cross‐validation using 30% of the opportunistic dataset used to calibrate the model or (2) external validation using different independent datasets derived from citizen science monitoring. We tested the effects of applying different combinations of filters to the citizen data and of complementing it with additional standardized fieldwork. 3. Cross‐validation with an internal evaluation dataset resulted in higher AUC (Area Under the receiver operating Curve) than external evaluation causing overestimation of model accuracy and did not select the same models; models integrating sampling effort performed better with external validation. AUC, specificity, and sensitivity of models calculated with different filtered external datasets differed for some species. However, for most species, complementary fieldwork was not necessary to obtain coherent results, as long as the citizen science data were strongly filtered. 4. Since external validation methods using independent data are considered more robust, filtering data from citizen sciences may make a valuable contribution to the assessment of SDM. Limited complementary fieldwork with volunteer's participation to complete ecological gradients may also possibly enhance citizen involvement and lead to better use of SDM in decision processes for nature conservation. John Wiley and Sons Inc. 2021-03-10 /pmc/articles/PMC8019030/ /pubmed/33841764 http://dx.doi.org/10.1002/ece3.7210 Text en © 2021 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Matutini, Florence
Baudry, Jacques
Pain, Guillaume
Sineau, Morgane
Pithon, Joséphine
How citizen science could improve species distribution models and their independent assessment
title How citizen science could improve species distribution models and their independent assessment
title_full How citizen science could improve species distribution models and their independent assessment
title_fullStr How citizen science could improve species distribution models and their independent assessment
title_full_unstemmed How citizen science could improve species distribution models and their independent assessment
title_short How citizen science could improve species distribution models and their independent assessment
title_sort how citizen science could improve species distribution models and their independent assessment
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8019030/
https://www.ncbi.nlm.nih.gov/pubmed/33841764
http://dx.doi.org/10.1002/ece3.7210
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