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A deep learning algorithm to detect coronavirus (COVID-19) disease using CT images

BACKGROUND: COVID-19 pandemic imposed a lockdown situation to the world these past months. Researchers and scientists around the globe faced serious efforts from its detection to its treatment. METHODS: Pathogenic laboratory testing is the gold standard but it is time-consuming. Lung CT-scans and X-...

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Autores principales: Mohammadpoor, Mojtaba, Sheikhi karizaki, Mehran, Sheikhi karizaki, Mina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8022578/
https://www.ncbi.nlm.nih.gov/pubmed/33834092
http://dx.doi.org/10.7717/peerj-cs.345
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author Mohammadpoor, Mojtaba
Sheikhi karizaki, Mehran
Sheikhi karizaki, Mina
author_facet Mohammadpoor, Mojtaba
Sheikhi karizaki, Mehran
Sheikhi karizaki, Mina
author_sort Mohammadpoor, Mojtaba
collection PubMed
description BACKGROUND: COVID-19 pandemic imposed a lockdown situation to the world these past months. Researchers and scientists around the globe faced serious efforts from its detection to its treatment. METHODS: Pathogenic laboratory testing is the gold standard but it is time-consuming. Lung CT-scans and X-rays are other common methods applied by researchers to detect COVID-19 positive cases. In this paper, we propose a deep learning neural network-based model as an alternative fast screening method that can be used for detecting the COVID-19 cases by analyzing CT-scans. RESULTS: Applying the proposed method on a publicly available dataset collected of positive and negative cases showed its ability on distinguishing them by analyzing each individual CT image. The effect of different parameters on the performance of the proposed model was studied and tabulated. By selecting random train and test images, the overall accuracy and ROC-AUC of the proposed model can easily exceed 95% and 90%, respectively, without any image pre-selecting or preprocessing.
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spelling pubmed-80225782021-04-07 A deep learning algorithm to detect coronavirus (COVID-19) disease using CT images Mohammadpoor, Mojtaba Sheikhi karizaki, Mehran Sheikhi karizaki, Mina PeerJ Comput Sci Computational Biology BACKGROUND: COVID-19 pandemic imposed a lockdown situation to the world these past months. Researchers and scientists around the globe faced serious efforts from its detection to its treatment. METHODS: Pathogenic laboratory testing is the gold standard but it is time-consuming. Lung CT-scans and X-rays are other common methods applied by researchers to detect COVID-19 positive cases. In this paper, we propose a deep learning neural network-based model as an alternative fast screening method that can be used for detecting the COVID-19 cases by analyzing CT-scans. RESULTS: Applying the proposed method on a publicly available dataset collected of positive and negative cases showed its ability on distinguishing them by analyzing each individual CT image. The effect of different parameters on the performance of the proposed model was studied and tabulated. By selecting random train and test images, the overall accuracy and ROC-AUC of the proposed model can easily exceed 95% and 90%, respectively, without any image pre-selecting or preprocessing. PeerJ Inc. 2021-04-01 /pmc/articles/PMC8022578/ /pubmed/33834092 http://dx.doi.org/10.7717/peerj-cs.345 Text en © 2021 Mohammadpoor et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ Computer Science) and either DOI or URL of the article must be cited.
spellingShingle Computational Biology
Mohammadpoor, Mojtaba
Sheikhi karizaki, Mehran
Sheikhi karizaki, Mina
A deep learning algorithm to detect coronavirus (COVID-19) disease using CT images
title A deep learning algorithm to detect coronavirus (COVID-19) disease using CT images
title_full A deep learning algorithm to detect coronavirus (COVID-19) disease using CT images
title_fullStr A deep learning algorithm to detect coronavirus (COVID-19) disease using CT images
title_full_unstemmed A deep learning algorithm to detect coronavirus (COVID-19) disease using CT images
title_short A deep learning algorithm to detect coronavirus (COVID-19) disease using CT images
title_sort deep learning algorithm to detect coronavirus (covid-19) disease using ct images
topic Computational Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8022578/
https://www.ncbi.nlm.nih.gov/pubmed/33834092
http://dx.doi.org/10.7717/peerj-cs.345
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