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Chemical Potential Differences in the Macroscopic Limit from Fluctuations in Small Systems
[Image: see text] We present a new method for computing chemical potential differences of macroscopic systems by sampling fluctuations in small systems. The small system method, presented by Schnell et al. [Schnell et al., J. Phys. Chem. B, 2011, 115, 10911], is used to create small embedded systems...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8023585/ https://www.ncbi.nlm.nih.gov/pubmed/33566592 http://dx.doi.org/10.1021/acs.jcim.0c01367 |
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author | Bråten, Vilde Wilhelmsen, Øivind Schnell, Sondre Kvalvåg |
author_facet | Bråten, Vilde Wilhelmsen, Øivind Schnell, Sondre Kvalvåg |
author_sort | Bråten, Vilde |
collection | PubMed |
description | [Image: see text] We present a new method for computing chemical potential differences of macroscopic systems by sampling fluctuations in small systems. The small system method, presented by Schnell et al. [Schnell et al., J. Phys. Chem. B, 2011, 115, 10911], is used to create small embedded systems from molecular dynamics simulations, in which fluctuations of the number of particles are sampled. The sampled fluctuations represent the Boltzmann distributed probability of the number of particles. The overlapping region of two such distributions, sampled from two different systems, is used to compute their chemical potential difference. Since the thermodynamics of small systems is known to deviate from the classical thermodynamic description, the particle distributions will deviate from the macroscopic behavior as well. We show how this can be utilized to calculate the size dependence of chemical potential differences and eventually extract the chemical potential difference in the thermodynamic limit. The macroscopic chemical potential difference is determined with a relative error of 3% in systems containing particles that interact through the truncated and shifted Lennard-Jones potential. In addition to computing chemical potential differences in the macroscopic limit directly from molecular dynamics simulation, the new method provides insights into the size dependency that is introduced to intensive properties in small systems. |
format | Online Article Text |
id | pubmed-8023585 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-80235852021-04-07 Chemical Potential Differences in the Macroscopic Limit from Fluctuations in Small Systems Bråten, Vilde Wilhelmsen, Øivind Schnell, Sondre Kvalvåg J Chem Inf Model [Image: see text] We present a new method for computing chemical potential differences of macroscopic systems by sampling fluctuations in small systems. The small system method, presented by Schnell et al. [Schnell et al., J. Phys. Chem. B, 2011, 115, 10911], is used to create small embedded systems from molecular dynamics simulations, in which fluctuations of the number of particles are sampled. The sampled fluctuations represent the Boltzmann distributed probability of the number of particles. The overlapping region of two such distributions, sampled from two different systems, is used to compute their chemical potential difference. Since the thermodynamics of small systems is known to deviate from the classical thermodynamic description, the particle distributions will deviate from the macroscopic behavior as well. We show how this can be utilized to calculate the size dependence of chemical potential differences and eventually extract the chemical potential difference in the thermodynamic limit. The macroscopic chemical potential difference is determined with a relative error of 3% in systems containing particles that interact through the truncated and shifted Lennard-Jones potential. In addition to computing chemical potential differences in the macroscopic limit directly from molecular dynamics simulation, the new method provides insights into the size dependency that is introduced to intensive properties in small systems. American Chemical Society 2021-02-10 2021-02-22 /pmc/articles/PMC8023585/ /pubmed/33566592 http://dx.doi.org/10.1021/acs.jcim.0c01367 Text en © 2021 The Authors. Published by American Chemical Society Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Bråten, Vilde Wilhelmsen, Øivind Schnell, Sondre Kvalvåg Chemical Potential Differences in the Macroscopic Limit from Fluctuations in Small Systems |
title | Chemical Potential Differences in the Macroscopic
Limit from Fluctuations in Small Systems |
title_full | Chemical Potential Differences in the Macroscopic
Limit from Fluctuations in Small Systems |
title_fullStr | Chemical Potential Differences in the Macroscopic
Limit from Fluctuations in Small Systems |
title_full_unstemmed | Chemical Potential Differences in the Macroscopic
Limit from Fluctuations in Small Systems |
title_short | Chemical Potential Differences in the Macroscopic
Limit from Fluctuations in Small Systems |
title_sort | chemical potential differences in the macroscopic
limit from fluctuations in small systems |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8023585/ https://www.ncbi.nlm.nih.gov/pubmed/33566592 http://dx.doi.org/10.1021/acs.jcim.0c01367 |
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