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Comparison of parametric and non‐parametric Bayesian inference for fusing sensory estimates in physiological time‐series analysis

The rapid proliferation of wearable devices for medical applications has necessitated the need for automated algorithms to provide labelling of physiological time‐series data to identify abnormal morphology. However, such algorithms are less reliable than gold‐standard human expert labels (where the...

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Detalles Bibliográficos
Autores principales: Zhu, Tingting, Javed, Hamza, Clifton, David A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8024027/
https://www.ncbi.nlm.nih.gov/pubmed/33850626
http://dx.doi.org/10.1049/htl2.12003
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author Zhu, Tingting
Javed, Hamza
Clifton, David A.
author_facet Zhu, Tingting
Javed, Hamza
Clifton, David A.
author_sort Zhu, Tingting
collection PubMed
description The rapid proliferation of wearable devices for medical applications has necessitated the need for automated algorithms to provide labelling of physiological time‐series data to identify abnormal morphology. However, such algorithms are less reliable than gold‐standard human expert labels (where the latter are typically difficult and expensive to obtain), due to their large inter‐ and intra‐subject variabilities. Actions taken in response to these algorithms can therefore result in sub‐optimal patient care. In a typical scenario where only unevenly sampled continuous or numeric estimates are provided, without access to the “ground truth”, it is challenging to choose which algorithms to trust and which to ignore, or even how to merge the outputs from multiple algorithms to form a more precise final estimate for individual patients. In this work, the novel application of two previously proposed parametric fully‐Bayesian graphical models is demonstrated for fusing labels from (i) independent and (ii) potentially correlated algorithms, validated on two publicly available datasets for the task of respiratory rate (RR) estimation. These unsupervised models aggregate RR labels and estimate jointly the assumed bias and precision of each algorithm. Fusing estimates in this way may then be used to infer the underlying ground truth for individual patients. It is shown that modelling the latent correlations between algorithms improves the RR estimates, when compared to commonly employed strategies in the literature. Finally, it is demonstrated that the adoption of a strongly Bayesian approach to inference using Gibbs sampling results in improved estimation over the current state‐of‐the‐art (e.g. hierarchical Gaussian processes) in physiological time‐series modelling.
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spelling pubmed-80240272021-04-12 Comparison of parametric and non‐parametric Bayesian inference for fusing sensory estimates in physiological time‐series analysis Zhu, Tingting Javed, Hamza Clifton, David A. Healthc Technol Lett Original Research Papers The rapid proliferation of wearable devices for medical applications has necessitated the need for automated algorithms to provide labelling of physiological time‐series data to identify abnormal morphology. However, such algorithms are less reliable than gold‐standard human expert labels (where the latter are typically difficult and expensive to obtain), due to their large inter‐ and intra‐subject variabilities. Actions taken in response to these algorithms can therefore result in sub‐optimal patient care. In a typical scenario where only unevenly sampled continuous or numeric estimates are provided, without access to the “ground truth”, it is challenging to choose which algorithms to trust and which to ignore, or even how to merge the outputs from multiple algorithms to form a more precise final estimate for individual patients. In this work, the novel application of two previously proposed parametric fully‐Bayesian graphical models is demonstrated for fusing labels from (i) independent and (ii) potentially correlated algorithms, validated on two publicly available datasets for the task of respiratory rate (RR) estimation. These unsupervised models aggregate RR labels and estimate jointly the assumed bias and precision of each algorithm. Fusing estimates in this way may then be used to infer the underlying ground truth for individual patients. It is shown that modelling the latent correlations between algorithms improves the RR estimates, when compared to commonly employed strategies in the literature. Finally, it is demonstrated that the adoption of a strongly Bayesian approach to inference using Gibbs sampling results in improved estimation over the current state‐of‐the‐art (e.g. hierarchical Gaussian processes) in physiological time‐series modelling. John Wiley and Sons Inc. 2021-02-23 /pmc/articles/PMC8024027/ /pubmed/33850626 http://dx.doi.org/10.1049/htl2.12003 Text en © 2021 The Authors. Healthcare Technology Letters published by John Wiley & Sons Ltd on behalf of The Institution of Engineering and Technology This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research Papers
Zhu, Tingting
Javed, Hamza
Clifton, David A.
Comparison of parametric and non‐parametric Bayesian inference for fusing sensory estimates in physiological time‐series analysis
title Comparison of parametric and non‐parametric Bayesian inference for fusing sensory estimates in physiological time‐series analysis
title_full Comparison of parametric and non‐parametric Bayesian inference for fusing sensory estimates in physiological time‐series analysis
title_fullStr Comparison of parametric and non‐parametric Bayesian inference for fusing sensory estimates in physiological time‐series analysis
title_full_unstemmed Comparison of parametric and non‐parametric Bayesian inference for fusing sensory estimates in physiological time‐series analysis
title_short Comparison of parametric and non‐parametric Bayesian inference for fusing sensory estimates in physiological time‐series analysis
title_sort comparison of parametric and non‐parametric bayesian inference for fusing sensory estimates in physiological time‐series analysis
topic Original Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8024027/
https://www.ncbi.nlm.nih.gov/pubmed/33850626
http://dx.doi.org/10.1049/htl2.12003
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