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Artificial intelligence in cancer research: learning at different levels of data granularity

From genome‐scale experimental studies to imaging data, behavioral footprints, and longitudinal healthcare records, the convergence of big data in cancer research and the advances in Artificial Intelligence (AI) is paving the way to develop a systems view of cancer. Nevertheless, this biomedical are...

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Detalles Bibliográficos
Autores principales: Cirillo, Davide, Núñez‐Carpintero, Iker, Valencia, Alfonso
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8024732/
https://www.ncbi.nlm.nih.gov/pubmed/33533192
http://dx.doi.org/10.1002/1878-0261.12920
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author Cirillo, Davide
Núñez‐Carpintero, Iker
Valencia, Alfonso
author_facet Cirillo, Davide
Núñez‐Carpintero, Iker
Valencia, Alfonso
author_sort Cirillo, Davide
collection PubMed
description From genome‐scale experimental studies to imaging data, behavioral footprints, and longitudinal healthcare records, the convergence of big data in cancer research and the advances in Artificial Intelligence (AI) is paving the way to develop a systems view of cancer. Nevertheless, this biomedical area is largely characterized by the co‐existence of big data and small data resources, highlighting the need for a deeper investigation about the crosstalk between different levels of data granularity, including varied sample sizes, labels, data types, and other data descriptors. This review introduces the current challenges, limitations, and solutions of AI in the heterogeneous landscape of data granularity in cancer research. Such a variety of cancer molecular and clinical data calls for advancing the interoperability among AI approaches, with particular emphasis on the synergy between discriminative and generative models that we discuss in this work with several examples of techniques and applications.
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spelling pubmed-80247322021-04-12 Artificial intelligence in cancer research: learning at different levels of data granularity Cirillo, Davide Núñez‐Carpintero, Iker Valencia, Alfonso Mol Oncol Review From genome‐scale experimental studies to imaging data, behavioral footprints, and longitudinal healthcare records, the convergence of big data in cancer research and the advances in Artificial Intelligence (AI) is paving the way to develop a systems view of cancer. Nevertheless, this biomedical area is largely characterized by the co‐existence of big data and small data resources, highlighting the need for a deeper investigation about the crosstalk between different levels of data granularity, including varied sample sizes, labels, data types, and other data descriptors. This review introduces the current challenges, limitations, and solutions of AI in the heterogeneous landscape of data granularity in cancer research. Such a variety of cancer molecular and clinical data calls for advancing the interoperability among AI approaches, with particular emphasis on the synergy between discriminative and generative models that we discuss in this work with several examples of techniques and applications. John Wiley and Sons Inc. 2021-02-20 2021-04 /pmc/articles/PMC8024732/ /pubmed/33533192 http://dx.doi.org/10.1002/1878-0261.12920 Text en © 2021 The Authors. Molecular Oncology published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Review
Cirillo, Davide
Núñez‐Carpintero, Iker
Valencia, Alfonso
Artificial intelligence in cancer research: learning at different levels of data granularity
title Artificial intelligence in cancer research: learning at different levels of data granularity
title_full Artificial intelligence in cancer research: learning at different levels of data granularity
title_fullStr Artificial intelligence in cancer research: learning at different levels of data granularity
title_full_unstemmed Artificial intelligence in cancer research: learning at different levels of data granularity
title_short Artificial intelligence in cancer research: learning at different levels of data granularity
title_sort artificial intelligence in cancer research: learning at different levels of data granularity
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8024732/
https://www.ncbi.nlm.nih.gov/pubmed/33533192
http://dx.doi.org/10.1002/1878-0261.12920
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