Cargando…
Prevalence and clinical phenotype of the triplicated α-globin genes and its ethnic and geographical distribution in Guizhou of China
BACKGROUND: α-thalassemia is relatively endemic in Guizhou province of southwestern China. To predict the clinical manifestations of α-globin gene aberration for genetic counseling, we examined the prevalence of the α-globin triplication and the genotype–phenotype correlation in this subpopulation M...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8025570/ https://www.ncbi.nlm.nih.gov/pubmed/33827577 http://dx.doi.org/10.1186/s12920-021-00944-9 |
_version_ | 1783675523143041024 |
---|---|
author | Luo, Xi Zhang, Xiang-mei Wu, Liu-song Chen, Jindong Chen, Yan |
author_facet | Luo, Xi Zhang, Xiang-mei Wu, Liu-song Chen, Jindong Chen, Yan |
author_sort | Luo, Xi |
collection | PubMed |
description | BACKGROUND: α-thalassemia is relatively endemic in Guizhou province of southwestern China. To predict the clinical manifestations of α-globin gene aberration for genetic counseling, we examined the prevalence of the α-globin triplication and the genotype–phenotype correlation in this subpopulation METHODS: A cohort of 7644 subjects was selected from nine ethnicities covering four regions in Guizhou province of China. Peripheral blood was collected from each participant for routine blood testing and hemoglobin electrophoresis. PCR-DNA sequencing and Gap-PCR were used to identify the thalassemia gene mutations. Chi-square tests and one-way analysis of variance (ANOVA) were used to statistically analyze the data. RESULTS: We found that the frequency of α-globin triplication in Guizhou province was 0.772% (59/7644). Genotypically, the ααα(anti4.2)/αα accounted for 0.523% (40/7644), the ααα(anti3.7)/αα for 0.235% (18/7644), and the ααα(anti3.7)/–(SEA) for 0.013% (1/7644). The ααα(anti4.2)/αα is more prevalent than the ααα(anti3.7)/αα in Guizhou. In addition, the frequency of the HKαα/αα (that by GAP-PCR is like ααα(anti4.2)/-α(3.7)) was 0.235% (18/7644). Ethnically, the Tujia group presented the highest prevalence (2.47%) of α-globin triplication. Geographically, the highest frequency of the α-globin triplication was identified in Qiannan region (2.23%). Of the triplicated α-globin cases, 5 coinherited with heterozygote β-thalassemia and presented various clinical manifestations of anemia. CONCLUSIONS: These data will be used to update the Chinese triplicated α-globin thalassemia database and provide insights into the pathogenesis of thalassemia. These findings will be helpful for the diagnosis of thalassemia and future genetic counseling in those regions. |
format | Online Article Text |
id | pubmed-8025570 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-80255702021-04-08 Prevalence and clinical phenotype of the triplicated α-globin genes and its ethnic and geographical distribution in Guizhou of China Luo, Xi Zhang, Xiang-mei Wu, Liu-song Chen, Jindong Chen, Yan BMC Med Genomics Research Article BACKGROUND: α-thalassemia is relatively endemic in Guizhou province of southwestern China. To predict the clinical manifestations of α-globin gene aberration for genetic counseling, we examined the prevalence of the α-globin triplication and the genotype–phenotype correlation in this subpopulation METHODS: A cohort of 7644 subjects was selected from nine ethnicities covering four regions in Guizhou province of China. Peripheral blood was collected from each participant for routine blood testing and hemoglobin electrophoresis. PCR-DNA sequencing and Gap-PCR were used to identify the thalassemia gene mutations. Chi-square tests and one-way analysis of variance (ANOVA) were used to statistically analyze the data. RESULTS: We found that the frequency of α-globin triplication in Guizhou province was 0.772% (59/7644). Genotypically, the ααα(anti4.2)/αα accounted for 0.523% (40/7644), the ααα(anti3.7)/αα for 0.235% (18/7644), and the ααα(anti3.7)/–(SEA) for 0.013% (1/7644). The ααα(anti4.2)/αα is more prevalent than the ααα(anti3.7)/αα in Guizhou. In addition, the frequency of the HKαα/αα (that by GAP-PCR is like ααα(anti4.2)/-α(3.7)) was 0.235% (18/7644). Ethnically, the Tujia group presented the highest prevalence (2.47%) of α-globin triplication. Geographically, the highest frequency of the α-globin triplication was identified in Qiannan region (2.23%). Of the triplicated α-globin cases, 5 coinherited with heterozygote β-thalassemia and presented various clinical manifestations of anemia. CONCLUSIONS: These data will be used to update the Chinese triplicated α-globin thalassemia database and provide insights into the pathogenesis of thalassemia. These findings will be helpful for the diagnosis of thalassemia and future genetic counseling in those regions. BioMed Central 2021-04-07 /pmc/articles/PMC8025570/ /pubmed/33827577 http://dx.doi.org/10.1186/s12920-021-00944-9 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Luo, Xi Zhang, Xiang-mei Wu, Liu-song Chen, Jindong Chen, Yan Prevalence and clinical phenotype of the triplicated α-globin genes and its ethnic and geographical distribution in Guizhou of China |
title | Prevalence and clinical phenotype of the triplicated α-globin genes and its ethnic and geographical distribution in Guizhou of China |
title_full | Prevalence and clinical phenotype of the triplicated α-globin genes and its ethnic and geographical distribution in Guizhou of China |
title_fullStr | Prevalence and clinical phenotype of the triplicated α-globin genes and its ethnic and geographical distribution in Guizhou of China |
title_full_unstemmed | Prevalence and clinical phenotype of the triplicated α-globin genes and its ethnic and geographical distribution in Guizhou of China |
title_short | Prevalence and clinical phenotype of the triplicated α-globin genes and its ethnic and geographical distribution in Guizhou of China |
title_sort | prevalence and clinical phenotype of the triplicated α-globin genes and its ethnic and geographical distribution in guizhou of china |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8025570/ https://www.ncbi.nlm.nih.gov/pubmed/33827577 http://dx.doi.org/10.1186/s12920-021-00944-9 |
work_keys_str_mv | AT luoxi prevalenceandclinicalphenotypeofthetriplicatedaglobingenesanditsethnicandgeographicaldistributioninguizhouofchina AT zhangxiangmei prevalenceandclinicalphenotypeofthetriplicatedaglobingenesanditsethnicandgeographicaldistributioninguizhouofchina AT wuliusong prevalenceandclinicalphenotypeofthetriplicatedaglobingenesanditsethnicandgeographicaldistributioninguizhouofchina AT chenjindong prevalenceandclinicalphenotypeofthetriplicatedaglobingenesanditsethnicandgeographicaldistributioninguizhouofchina AT chenyan prevalenceandclinicalphenotypeofthetriplicatedaglobingenesanditsethnicandgeographicaldistributioninguizhouofchina |