Cargando…

Synthesis and structure of a complex of copper(I) with l-cysteine and chloride ions containing Cu(12)S(6) nanoclusters

The title hydrated copper(I)–l-cysteine–chloride complex has a polymeric structure of composition {[Cu(16)(CysH(2))(6)Cl(16)]·xH(2)O}(n) [CysH(2) = HO(2)CCH(NH(3) (+))CH(2)S(−) or C(3)H(7)NO(2)S], namely, poly[[tetra-μ(3)-chlorido-deca-μ(2)-chlorido-di­chlorido­hexa­kis­(μ(4)-l-cysteinato)hexa­deca­...

Descripción completa

Detalles Bibliográficos
Autores principales: Gizatullin, Amir, Becker, Jonathan, Islamov, Daut, Serov, Nikita, Schindler, Siegfried, Klimovitskii, Alexander, Shtyrlin, Valery
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8025850/
https://www.ncbi.nlm.nih.gov/pubmed/33936751
http://dx.doi.org/10.1107/S2056989021002012
_version_ 1783675567053209600
author Gizatullin, Amir
Becker, Jonathan
Islamov, Daut
Serov, Nikita
Schindler, Siegfried
Klimovitskii, Alexander
Shtyrlin, Valery
author_facet Gizatullin, Amir
Becker, Jonathan
Islamov, Daut
Serov, Nikita
Schindler, Siegfried
Klimovitskii, Alexander
Shtyrlin, Valery
author_sort Gizatullin, Amir
collection PubMed
description The title hydrated copper(I)–l-cysteine–chloride complex has a polymeric structure of composition {[Cu(16)(CysH(2))(6)Cl(16)]·xH(2)O}(n) [CysH(2) = HO(2)CCH(NH(3) (+))CH(2)S(−) or C(3)H(7)NO(2)S], namely, poly[[tetra-μ(3)-chlorido-deca-μ(2)-chlorido-di­chlorido­hexa­kis­(μ(4)-l-cysteinato)hexa­deca­copper] polyhydrate]. The copper atoms are linked by thiol­ate groups to form Cu(12)S(6) nanoclusters that take the form of a tetra­kis cubocta­hedron, made up of a Cu(12) cubo-octa­hedral subunit that is augmented by six sulfur atoms that are located symmetrically atop of each of the Cu(4) square units of the Cu(12) cubo-octa­hedron. The six S atoms thus form an octa­hedral subunit themselves. The exterior of the Cu(12)S(6) sphere is decorated by chloride ions and trichlorocuprate units. Three chloride ions are coordinated in an irregular fashion to trigonal Cu(3) subunits of the nanocluster, and four trigonal CuCl(3) units are bonded via each of their chloride ions to a copper ion on the Cu(12)S(6) sphere. The trigonal CuCl(3) units are linked via Cu(2)Cl(2) bridges covalently connected to equivalent units in neighboring nanoclusters. Four such connections are arranged in a tetra­hedral fashion, thus creating an infinite diamond-like net of Cu(12)S(6)Cl(4)(CuCl(3))(4) nanoclusters. The network thus formed results in large channels occupied by solvent mol­ecules that are mostly too ill-defined to model. The content of the voids, believed to be water mol­ecules, was accounted for via reverse Fourier-transform methods using the SQUEEZE algorithm [Spek (2015 ▸). Acta Cryst. C71, 9–18]. The protonated amino groups of the cysteine ligands are directed away from the sphere, forming N—H⋯Cl hydrogen bonds with chloride-ion acceptors of their cluster. The protonated carb­oxy groups point outwards and presumably form O—H⋯O hydrogen bonds with the unresolved water mol­ecules of the solvent channels. Disorder is observed in one of the two crystallographically unique [Cu(16)(CysH(2))(6)Cl(16)] segments for three of the six cysteine anions.
format Online
Article
Text
id pubmed-8025850
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher International Union of Crystallography
record_format MEDLINE/PubMed
spelling pubmed-80258502021-04-30 Synthesis and structure of a complex of copper(I) with l-cysteine and chloride ions containing Cu(12)S(6) nanoclusters Gizatullin, Amir Becker, Jonathan Islamov, Daut Serov, Nikita Schindler, Siegfried Klimovitskii, Alexander Shtyrlin, Valery Acta Crystallogr E Crystallogr Commun Research Communications The title hydrated copper(I)–l-cysteine–chloride complex has a polymeric structure of composition {[Cu(16)(CysH(2))(6)Cl(16)]·xH(2)O}(n) [CysH(2) = HO(2)CCH(NH(3) (+))CH(2)S(−) or C(3)H(7)NO(2)S], namely, poly[[tetra-μ(3)-chlorido-deca-μ(2)-chlorido-di­chlorido­hexa­kis­(μ(4)-l-cysteinato)hexa­deca­copper] polyhydrate]. The copper atoms are linked by thiol­ate groups to form Cu(12)S(6) nanoclusters that take the form of a tetra­kis cubocta­hedron, made up of a Cu(12) cubo-octa­hedral subunit that is augmented by six sulfur atoms that are located symmetrically atop of each of the Cu(4) square units of the Cu(12) cubo-octa­hedron. The six S atoms thus form an octa­hedral subunit themselves. The exterior of the Cu(12)S(6) sphere is decorated by chloride ions and trichlorocuprate units. Three chloride ions are coordinated in an irregular fashion to trigonal Cu(3) subunits of the nanocluster, and four trigonal CuCl(3) units are bonded via each of their chloride ions to a copper ion on the Cu(12)S(6) sphere. The trigonal CuCl(3) units are linked via Cu(2)Cl(2) bridges covalently connected to equivalent units in neighboring nanoclusters. Four such connections are arranged in a tetra­hedral fashion, thus creating an infinite diamond-like net of Cu(12)S(6)Cl(4)(CuCl(3))(4) nanoclusters. The network thus formed results in large channels occupied by solvent mol­ecules that are mostly too ill-defined to model. The content of the voids, believed to be water mol­ecules, was accounted for via reverse Fourier-transform methods using the SQUEEZE algorithm [Spek (2015 ▸). Acta Cryst. C71, 9–18]. The protonated amino groups of the cysteine ligands are directed away from the sphere, forming N—H⋯Cl hydrogen bonds with chloride-ion acceptors of their cluster. The protonated carb­oxy groups point outwards and presumably form O—H⋯O hydrogen bonds with the unresolved water mol­ecules of the solvent channels. Disorder is observed in one of the two crystallographically unique [Cu(16)(CysH(2))(6)Cl(16)] segments for three of the six cysteine anions. International Union of Crystallography 2021-03-02 /pmc/articles/PMC8025850/ /pubmed/33936751 http://dx.doi.org/10.1107/S2056989021002012 Text en © Gizatullin et al. 2021 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Communications
Gizatullin, Amir
Becker, Jonathan
Islamov, Daut
Serov, Nikita
Schindler, Siegfried
Klimovitskii, Alexander
Shtyrlin, Valery
Synthesis and structure of a complex of copper(I) with l-cysteine and chloride ions containing Cu(12)S(6) nanoclusters
title Synthesis and structure of a complex of copper(I) with l-cysteine and chloride ions containing Cu(12)S(6) nanoclusters
title_full Synthesis and structure of a complex of copper(I) with l-cysteine and chloride ions containing Cu(12)S(6) nanoclusters
title_fullStr Synthesis and structure of a complex of copper(I) with l-cysteine and chloride ions containing Cu(12)S(6) nanoclusters
title_full_unstemmed Synthesis and structure of a complex of copper(I) with l-cysteine and chloride ions containing Cu(12)S(6) nanoclusters
title_short Synthesis and structure of a complex of copper(I) with l-cysteine and chloride ions containing Cu(12)S(6) nanoclusters
title_sort synthesis and structure of a complex of copper(i) with l-cysteine and chloride ions containing cu(12)s(6) nanoclusters
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8025850/
https://www.ncbi.nlm.nih.gov/pubmed/33936751
http://dx.doi.org/10.1107/S2056989021002012
work_keys_str_mv AT gizatullinamir synthesisandstructureofacomplexofcopperiwithlcysteineandchlorideionscontainingcu12s6nanoclusters
AT beckerjonathan synthesisandstructureofacomplexofcopperiwithlcysteineandchlorideionscontainingcu12s6nanoclusters
AT islamovdaut synthesisandstructureofacomplexofcopperiwithlcysteineandchlorideionscontainingcu12s6nanoclusters
AT serovnikita synthesisandstructureofacomplexofcopperiwithlcysteineandchlorideionscontainingcu12s6nanoclusters
AT schindlersiegfried synthesisandstructureofacomplexofcopperiwithlcysteineandchlorideionscontainingcu12s6nanoclusters
AT klimovitskiialexander synthesisandstructureofacomplexofcopperiwithlcysteineandchlorideionscontainingcu12s6nanoclusters
AT shtyrlinvalery synthesisandstructureofacomplexofcopperiwithlcysteineandchlorideionscontainingcu12s6nanoclusters