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Crystal structure, Hirshfeld surface analysis and density functional theory study of 6-methyl-2-[(5-methyl­isoxazol-3-yl)meth­yl]-1H-benzimidazole

In the title mol­ecule, C(13)H(13)N(3)O, the isoxazole ring is inclined to the benzimidazole ring at a dihedral angle of 69.28 (14)°. In the crystal, N—H⋯N hydrogen bonds between neighboring benzimidazole rings form chains along the a-axis direction. Hirshfeld surface analysis indicates that the mos...

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Autores principales: Idrissi, Ahlam, Chkirate, Karim, Abad, Nadeem, Djerrari, Bahia, Achour, Redouane, Essassi, El Mokhtar, Van Meervelt, Luc
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8025869/
https://www.ncbi.nlm.nih.gov/pubmed/33936764
http://dx.doi.org/10.1107/S2056989021002723
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author Idrissi, Ahlam
Chkirate, Karim
Abad, Nadeem
Djerrari, Bahia
Achour, Redouane
Essassi, El Mokhtar
Van Meervelt, Luc
author_facet Idrissi, Ahlam
Chkirate, Karim
Abad, Nadeem
Djerrari, Bahia
Achour, Redouane
Essassi, El Mokhtar
Van Meervelt, Luc
author_sort Idrissi, Ahlam
collection PubMed
description In the title mol­ecule, C(13)H(13)N(3)O, the isoxazole ring is inclined to the benzimidazole ring at a dihedral angle of 69.28 (14)°. In the crystal, N—H⋯N hydrogen bonds between neighboring benzimidazole rings form chains along the a-axis direction. Hirshfeld surface analysis indicates that the most important contributions to the crystal packing are from H⋯H (48.8%), H⋯C/C⋯H (20.9%) and H⋯N/N⋯H (19.3%) inter­actions. The optimized structure calculated using density functional theory at the B3LYP/6–311 G(d,p) level is compared with the experimentally determined structure in the solid state. The calculated highest occupied mol­ecular orbital (HOMO) and lowest unoccupied mol­ecular orbital (LUMO) energy gap is 4.9266 eV.
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spelling pubmed-80258692021-04-30 Crystal structure, Hirshfeld surface analysis and density functional theory study of 6-methyl-2-[(5-methyl­isoxazol-3-yl)meth­yl]-1H-benzimidazole Idrissi, Ahlam Chkirate, Karim Abad, Nadeem Djerrari, Bahia Achour, Redouane Essassi, El Mokhtar Van Meervelt, Luc Acta Crystallogr E Crystallogr Commun Research Communications In the title mol­ecule, C(13)H(13)N(3)O, the isoxazole ring is inclined to the benzimidazole ring at a dihedral angle of 69.28 (14)°. In the crystal, N—H⋯N hydrogen bonds between neighboring benzimidazole rings form chains along the a-axis direction. Hirshfeld surface analysis indicates that the most important contributions to the crystal packing are from H⋯H (48.8%), H⋯C/C⋯H (20.9%) and H⋯N/N⋯H (19.3%) inter­actions. The optimized structure calculated using density functional theory at the B3LYP/6–311 G(d,p) level is compared with the experimentally determined structure in the solid state. The calculated highest occupied mol­ecular orbital (HOMO) and lowest unoccupied mol­ecular orbital (LUMO) energy gap is 4.9266 eV. International Union of Crystallography 2021-03-19 /pmc/articles/PMC8025869/ /pubmed/33936764 http://dx.doi.org/10.1107/S2056989021002723 Text en © Idrissi et al. 2021 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Communications
Idrissi, Ahlam
Chkirate, Karim
Abad, Nadeem
Djerrari, Bahia
Achour, Redouane
Essassi, El Mokhtar
Van Meervelt, Luc
Crystal structure, Hirshfeld surface analysis and density functional theory study of 6-methyl-2-[(5-methyl­isoxazol-3-yl)meth­yl]-1H-benzimidazole
title Crystal structure, Hirshfeld surface analysis and density functional theory study of 6-methyl-2-[(5-methyl­isoxazol-3-yl)meth­yl]-1H-benzimidazole
title_full Crystal structure, Hirshfeld surface analysis and density functional theory study of 6-methyl-2-[(5-methyl­isoxazol-3-yl)meth­yl]-1H-benzimidazole
title_fullStr Crystal structure, Hirshfeld surface analysis and density functional theory study of 6-methyl-2-[(5-methyl­isoxazol-3-yl)meth­yl]-1H-benzimidazole
title_full_unstemmed Crystal structure, Hirshfeld surface analysis and density functional theory study of 6-methyl-2-[(5-methyl­isoxazol-3-yl)meth­yl]-1H-benzimidazole
title_short Crystal structure, Hirshfeld surface analysis and density functional theory study of 6-methyl-2-[(5-methyl­isoxazol-3-yl)meth­yl]-1H-benzimidazole
title_sort crystal structure, hirshfeld surface analysis and density functional theory study of 6-methyl-2-[(5-methyl­isoxazol-3-yl)meth­yl]-1h-benzimidazole
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8025869/
https://www.ncbi.nlm.nih.gov/pubmed/33936764
http://dx.doi.org/10.1107/S2056989021002723
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