Cargando…

Reference gene selection for expression studies in the reproductive axis tissues of Magang geese at different reproductive stages under light treatment

In quantitative PCR research, appropriate reference genes are key to determining accurate mRNA expression levels. In order to screen the reference genes suitable for detecting gene expression in tissues of the reproductive axis, a total of 420 (males and females = 1:5) 3-year-old Magang geese were s...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Bei-Bei, Shen, Xu, Li, Xiu-Jin, Tian, Yun-Bo, Ouyang, Hong-Jia, Huang, Yun-Mao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8026621/
https://www.ncbi.nlm.nih.gov/pubmed/33828187
http://dx.doi.org/10.1038/s41598-021-87169-z
_version_ 1783675688763523072
author Zhang, Bei-Bei
Shen, Xu
Li, Xiu-Jin
Tian, Yun-Bo
Ouyang, Hong-Jia
Huang, Yun-Mao
author_facet Zhang, Bei-Bei
Shen, Xu
Li, Xiu-Jin
Tian, Yun-Bo
Ouyang, Hong-Jia
Huang, Yun-Mao
author_sort Zhang, Bei-Bei
collection PubMed
description In quantitative PCR research, appropriate reference genes are key to determining accurate mRNA expression levels. In order to screen the reference genes suitable for detecting gene expression in tissues of the reproductive axis, a total of 420 (males and females = 1:5) 3-year-old Magang geese were selected and subjected to light treatment. The hypothalamus, pituitary and testicular tissues were subsequently collected at different stages. Ten genes including HPRT1, GAPDH, ACTB, LDHA, SDHA, B2M, TUBB4, TFRC, RPS2 and RPL4 were selected as candidate reference genes. The expression of these genes in goose reproductive axis tissues was detected by real-time fluorescent quantitative PCR. The ΔCT, geNorm, NormFinder and BestKeeper algorithms were applied to sort gene expression according to stability. The results showed that ACTB and TUBB4 were the most suitable reference genes for the hypothalamic tissue of Magang goose in the three breeding stages; HPRT1 and RPL4 for pituitary tissue; and HPRT1 and LDHA for testicular tissue. For all three reproductive axis tissues, ACTB was the most suitable reference gene, whereas the least stable reference gene was GAPDH. Altogether, these results can provide references for tissue expression studies in geese under light treatment.
format Online
Article
Text
id pubmed-8026621
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-80266212021-04-08 Reference gene selection for expression studies in the reproductive axis tissues of Magang geese at different reproductive stages under light treatment Zhang, Bei-Bei Shen, Xu Li, Xiu-Jin Tian, Yun-Bo Ouyang, Hong-Jia Huang, Yun-Mao Sci Rep Article In quantitative PCR research, appropriate reference genes are key to determining accurate mRNA expression levels. In order to screen the reference genes suitable for detecting gene expression in tissues of the reproductive axis, a total of 420 (males and females = 1:5) 3-year-old Magang geese were selected and subjected to light treatment. The hypothalamus, pituitary and testicular tissues were subsequently collected at different stages. Ten genes including HPRT1, GAPDH, ACTB, LDHA, SDHA, B2M, TUBB4, TFRC, RPS2 and RPL4 were selected as candidate reference genes. The expression of these genes in goose reproductive axis tissues was detected by real-time fluorescent quantitative PCR. The ΔCT, geNorm, NormFinder and BestKeeper algorithms were applied to sort gene expression according to stability. The results showed that ACTB and TUBB4 were the most suitable reference genes for the hypothalamic tissue of Magang goose in the three breeding stages; HPRT1 and RPL4 for pituitary tissue; and HPRT1 and LDHA for testicular tissue. For all three reproductive axis tissues, ACTB was the most suitable reference gene, whereas the least stable reference gene was GAPDH. Altogether, these results can provide references for tissue expression studies in geese under light treatment. Nature Publishing Group UK 2021-04-07 /pmc/articles/PMC8026621/ /pubmed/33828187 http://dx.doi.org/10.1038/s41598-021-87169-z Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Zhang, Bei-Bei
Shen, Xu
Li, Xiu-Jin
Tian, Yun-Bo
Ouyang, Hong-Jia
Huang, Yun-Mao
Reference gene selection for expression studies in the reproductive axis tissues of Magang geese at different reproductive stages under light treatment
title Reference gene selection for expression studies in the reproductive axis tissues of Magang geese at different reproductive stages under light treatment
title_full Reference gene selection for expression studies in the reproductive axis tissues of Magang geese at different reproductive stages under light treatment
title_fullStr Reference gene selection for expression studies in the reproductive axis tissues of Magang geese at different reproductive stages under light treatment
title_full_unstemmed Reference gene selection for expression studies in the reproductive axis tissues of Magang geese at different reproductive stages under light treatment
title_short Reference gene selection for expression studies in the reproductive axis tissues of Magang geese at different reproductive stages under light treatment
title_sort reference gene selection for expression studies in the reproductive axis tissues of magang geese at different reproductive stages under light treatment
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8026621/
https://www.ncbi.nlm.nih.gov/pubmed/33828187
http://dx.doi.org/10.1038/s41598-021-87169-z
work_keys_str_mv AT zhangbeibei referencegeneselectionforexpressionstudiesinthereproductiveaxistissuesofmaganggeeseatdifferentreproductivestagesunderlighttreatment
AT shenxu referencegeneselectionforexpressionstudiesinthereproductiveaxistissuesofmaganggeeseatdifferentreproductivestagesunderlighttreatment
AT lixiujin referencegeneselectionforexpressionstudiesinthereproductiveaxistissuesofmaganggeeseatdifferentreproductivestagesunderlighttreatment
AT tianyunbo referencegeneselectionforexpressionstudiesinthereproductiveaxistissuesofmaganggeeseatdifferentreproductivestagesunderlighttreatment
AT ouyanghongjia referencegeneselectionforexpressionstudiesinthereproductiveaxistissuesofmaganggeeseatdifferentreproductivestagesunderlighttreatment
AT huangyunmao referencegeneselectionforexpressionstudiesinthereproductiveaxistissuesofmaganggeeseatdifferentreproductivestagesunderlighttreatment