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Reference gene selection for expression studies in the reproductive axis tissues of Magang geese at different reproductive stages under light treatment
In quantitative PCR research, appropriate reference genes are key to determining accurate mRNA expression levels. In order to screen the reference genes suitable for detecting gene expression in tissues of the reproductive axis, a total of 420 (males and females = 1:5) 3-year-old Magang geese were s...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8026621/ https://www.ncbi.nlm.nih.gov/pubmed/33828187 http://dx.doi.org/10.1038/s41598-021-87169-z |
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author | Zhang, Bei-Bei Shen, Xu Li, Xiu-Jin Tian, Yun-Bo Ouyang, Hong-Jia Huang, Yun-Mao |
author_facet | Zhang, Bei-Bei Shen, Xu Li, Xiu-Jin Tian, Yun-Bo Ouyang, Hong-Jia Huang, Yun-Mao |
author_sort | Zhang, Bei-Bei |
collection | PubMed |
description | In quantitative PCR research, appropriate reference genes are key to determining accurate mRNA expression levels. In order to screen the reference genes suitable for detecting gene expression in tissues of the reproductive axis, a total of 420 (males and females = 1:5) 3-year-old Magang geese were selected and subjected to light treatment. The hypothalamus, pituitary and testicular tissues were subsequently collected at different stages. Ten genes including HPRT1, GAPDH, ACTB, LDHA, SDHA, B2M, TUBB4, TFRC, RPS2 and RPL4 were selected as candidate reference genes. The expression of these genes in goose reproductive axis tissues was detected by real-time fluorescent quantitative PCR. The ΔCT, geNorm, NormFinder and BestKeeper algorithms were applied to sort gene expression according to stability. The results showed that ACTB and TUBB4 were the most suitable reference genes for the hypothalamic tissue of Magang goose in the three breeding stages; HPRT1 and RPL4 for pituitary tissue; and HPRT1 and LDHA for testicular tissue. For all three reproductive axis tissues, ACTB was the most suitable reference gene, whereas the least stable reference gene was GAPDH. Altogether, these results can provide references for tissue expression studies in geese under light treatment. |
format | Online Article Text |
id | pubmed-8026621 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-80266212021-04-08 Reference gene selection for expression studies in the reproductive axis tissues of Magang geese at different reproductive stages under light treatment Zhang, Bei-Bei Shen, Xu Li, Xiu-Jin Tian, Yun-Bo Ouyang, Hong-Jia Huang, Yun-Mao Sci Rep Article In quantitative PCR research, appropriate reference genes are key to determining accurate mRNA expression levels. In order to screen the reference genes suitable for detecting gene expression in tissues of the reproductive axis, a total of 420 (males and females = 1:5) 3-year-old Magang geese were selected and subjected to light treatment. The hypothalamus, pituitary and testicular tissues were subsequently collected at different stages. Ten genes including HPRT1, GAPDH, ACTB, LDHA, SDHA, B2M, TUBB4, TFRC, RPS2 and RPL4 were selected as candidate reference genes. The expression of these genes in goose reproductive axis tissues was detected by real-time fluorescent quantitative PCR. The ΔCT, geNorm, NormFinder and BestKeeper algorithms were applied to sort gene expression according to stability. The results showed that ACTB and TUBB4 were the most suitable reference genes for the hypothalamic tissue of Magang goose in the three breeding stages; HPRT1 and RPL4 for pituitary tissue; and HPRT1 and LDHA for testicular tissue. For all three reproductive axis tissues, ACTB was the most suitable reference gene, whereas the least stable reference gene was GAPDH. Altogether, these results can provide references for tissue expression studies in geese under light treatment. Nature Publishing Group UK 2021-04-07 /pmc/articles/PMC8026621/ /pubmed/33828187 http://dx.doi.org/10.1038/s41598-021-87169-z Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Zhang, Bei-Bei Shen, Xu Li, Xiu-Jin Tian, Yun-Bo Ouyang, Hong-Jia Huang, Yun-Mao Reference gene selection for expression studies in the reproductive axis tissues of Magang geese at different reproductive stages under light treatment |
title | Reference gene selection for expression studies in the reproductive axis tissues of Magang geese at different reproductive stages under light treatment |
title_full | Reference gene selection for expression studies in the reproductive axis tissues of Magang geese at different reproductive stages under light treatment |
title_fullStr | Reference gene selection for expression studies in the reproductive axis tissues of Magang geese at different reproductive stages under light treatment |
title_full_unstemmed | Reference gene selection for expression studies in the reproductive axis tissues of Magang geese at different reproductive stages under light treatment |
title_short | Reference gene selection for expression studies in the reproductive axis tissues of Magang geese at different reproductive stages under light treatment |
title_sort | reference gene selection for expression studies in the reproductive axis tissues of magang geese at different reproductive stages under light treatment |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8026621/ https://www.ncbi.nlm.nih.gov/pubmed/33828187 http://dx.doi.org/10.1038/s41598-021-87169-z |
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