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Deep learning-based automatic meibomian gland segmentation and morphology assessment in infrared meibography
Meibomian glands (MG) are large sebaceous glands located below the tarsal conjunctiva and the abnormalities of these glands cause Meibomian gland dysfunction (MGD) which is responsible for evaporative dry eye disease (DED). Accurate MG segmentation is a key prerequisite for automated imaging based M...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8027879/ https://www.ncbi.nlm.nih.gov/pubmed/33828177 http://dx.doi.org/10.1038/s41598-021-87314-8 |
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author | Setu, Md Asif Khan Horstmann, Jens Schmidt, Stefan Stern, Michael E. Steven, Philipp |
author_facet | Setu, Md Asif Khan Horstmann, Jens Schmidt, Stefan Stern, Michael E. Steven, Philipp |
author_sort | Setu, Md Asif Khan |
collection | PubMed |
description | Meibomian glands (MG) are large sebaceous glands located below the tarsal conjunctiva and the abnormalities of these glands cause Meibomian gland dysfunction (MGD) which is responsible for evaporative dry eye disease (DED). Accurate MG segmentation is a key prerequisite for automated imaging based MGD related DED diagnosis. However, Automatic MG segmentation in infrared meibography is a challenging task due to image artifacts. A deep learning-based MG segmentation has been proposed which directly learns MG features from the training image dataset without any image pre-processing. The model is trained and evaluated using 728 anonymized clinical meibography images. Additionally, automatic MG morphometric parameters, gland number, length, width, and tortuosity assessment were proposed. The average precision, recall, and F1 score were achieved 83%, 81%, and 84% respectively on the testing dataset with AUC value of 0.96 based on ROC curve and dice coefficient of 84%. Single image segmentation and morphometric parameter evaluation took on average 1.33 s. To the best of our knowledge, this is the first time that a validated deep learning-based approach is applied in MG segmentation and evaluation for both upper and lower eyelids. |
format | Online Article Text |
id | pubmed-8027879 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-80278792021-04-09 Deep learning-based automatic meibomian gland segmentation and morphology assessment in infrared meibography Setu, Md Asif Khan Horstmann, Jens Schmidt, Stefan Stern, Michael E. Steven, Philipp Sci Rep Article Meibomian glands (MG) are large sebaceous glands located below the tarsal conjunctiva and the abnormalities of these glands cause Meibomian gland dysfunction (MGD) which is responsible for evaporative dry eye disease (DED). Accurate MG segmentation is a key prerequisite for automated imaging based MGD related DED diagnosis. However, Automatic MG segmentation in infrared meibography is a challenging task due to image artifacts. A deep learning-based MG segmentation has been proposed which directly learns MG features from the training image dataset without any image pre-processing. The model is trained and evaluated using 728 anonymized clinical meibography images. Additionally, automatic MG morphometric parameters, gland number, length, width, and tortuosity assessment were proposed. The average precision, recall, and F1 score were achieved 83%, 81%, and 84% respectively on the testing dataset with AUC value of 0.96 based on ROC curve and dice coefficient of 84%. Single image segmentation and morphometric parameter evaluation took on average 1.33 s. To the best of our knowledge, this is the first time that a validated deep learning-based approach is applied in MG segmentation and evaluation for both upper and lower eyelids. Nature Publishing Group UK 2021-04-07 /pmc/articles/PMC8027879/ /pubmed/33828177 http://dx.doi.org/10.1038/s41598-021-87314-8 Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Setu, Md Asif Khan Horstmann, Jens Schmidt, Stefan Stern, Michael E. Steven, Philipp Deep learning-based automatic meibomian gland segmentation and morphology assessment in infrared meibography |
title | Deep learning-based automatic meibomian gland segmentation and morphology assessment in infrared meibography |
title_full | Deep learning-based automatic meibomian gland segmentation and morphology assessment in infrared meibography |
title_fullStr | Deep learning-based automatic meibomian gland segmentation and morphology assessment in infrared meibography |
title_full_unstemmed | Deep learning-based automatic meibomian gland segmentation and morphology assessment in infrared meibography |
title_short | Deep learning-based automatic meibomian gland segmentation and morphology assessment in infrared meibography |
title_sort | deep learning-based automatic meibomian gland segmentation and morphology assessment in infrared meibography |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8027879/ https://www.ncbi.nlm.nih.gov/pubmed/33828177 http://dx.doi.org/10.1038/s41598-021-87314-8 |
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