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Microbial competition reduces metabolic interaction distances to the low µm-range

Metabolic interactions between cells affect microbial community compositions and hence their function in ecosystems. It is well-known that under competition for the exchanged metabolite, concentration gradients constrain the distances over which interactions can occur. However, interaction distances...

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Autores principales: van Tatenhove-Pel, Rinke J., Rijavec, Tomaž, Lapanje, Aleš, van Swam, Iris, Zwering, Emile, Hernandez-Valdes, Jhonatan A., Kuipers, Oscar P., Picioreanu, Cristian, Teusink, Bas, Bachmann, Herwig
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8027890/
https://www.ncbi.nlm.nih.gov/pubmed/33077887
http://dx.doi.org/10.1038/s41396-020-00806-9
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author van Tatenhove-Pel, Rinke J.
Rijavec, Tomaž
Lapanje, Aleš
van Swam, Iris
Zwering, Emile
Hernandez-Valdes, Jhonatan A.
Kuipers, Oscar P.
Picioreanu, Cristian
Teusink, Bas
Bachmann, Herwig
author_facet van Tatenhove-Pel, Rinke J.
Rijavec, Tomaž
Lapanje, Aleš
van Swam, Iris
Zwering, Emile
Hernandez-Valdes, Jhonatan A.
Kuipers, Oscar P.
Picioreanu, Cristian
Teusink, Bas
Bachmann, Herwig
author_sort van Tatenhove-Pel, Rinke J.
collection PubMed
description Metabolic interactions between cells affect microbial community compositions and hence their function in ecosystems. It is well-known that under competition for the exchanged metabolite, concentration gradients constrain the distances over which interactions can occur. However, interaction distances are typically quantified in two-dimensional systems or without accounting for competition or other metabolite-removal, conditions which may not very often match natural ecosystems. We here analyze the impact of cell-to-cell distance on unidirectional cross-feeding in a three-dimensional aqueous system with competition for the exchanged metabolite. Effective interaction distances were computed with a reaction-diffusion model and experimentally verified by growing a synthetic consortium of 1 µm-sized metabolite producer, receiver, and competitor cells in different spatial structures. We show that receivers cannot interact with producers located on average 15 µm away from them, as product concentration gradients flatten close to producer cells. We developed an aggregation protocol and varied the receiver cells’ product affinity, to show that within producer–receiver aggregates even low-affinity receiver cells could interact with producers. These results show that competition or other metabolite-removal of a public good in a three-dimensional system reduces metabolic interaction distances to the low µm-range, highlighting the importance of concentration gradients as physical constraint for cellular interactions.
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spelling pubmed-80278902021-04-21 Microbial competition reduces metabolic interaction distances to the low µm-range van Tatenhove-Pel, Rinke J. Rijavec, Tomaž Lapanje, Aleš van Swam, Iris Zwering, Emile Hernandez-Valdes, Jhonatan A. Kuipers, Oscar P. Picioreanu, Cristian Teusink, Bas Bachmann, Herwig ISME J Article Metabolic interactions between cells affect microbial community compositions and hence their function in ecosystems. It is well-known that under competition for the exchanged metabolite, concentration gradients constrain the distances over which interactions can occur. However, interaction distances are typically quantified in two-dimensional systems or without accounting for competition or other metabolite-removal, conditions which may not very often match natural ecosystems. We here analyze the impact of cell-to-cell distance on unidirectional cross-feeding in a three-dimensional aqueous system with competition for the exchanged metabolite. Effective interaction distances were computed with a reaction-diffusion model and experimentally verified by growing a synthetic consortium of 1 µm-sized metabolite producer, receiver, and competitor cells in different spatial structures. We show that receivers cannot interact with producers located on average 15 µm away from them, as product concentration gradients flatten close to producer cells. We developed an aggregation protocol and varied the receiver cells’ product affinity, to show that within producer–receiver aggregates even low-affinity receiver cells could interact with producers. These results show that competition or other metabolite-removal of a public good in a three-dimensional system reduces metabolic interaction distances to the low µm-range, highlighting the importance of concentration gradients as physical constraint for cellular interactions. Nature Publishing Group UK 2020-10-19 2021-03 /pmc/articles/PMC8027890/ /pubmed/33077887 http://dx.doi.org/10.1038/s41396-020-00806-9 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
van Tatenhove-Pel, Rinke J.
Rijavec, Tomaž
Lapanje, Aleš
van Swam, Iris
Zwering, Emile
Hernandez-Valdes, Jhonatan A.
Kuipers, Oscar P.
Picioreanu, Cristian
Teusink, Bas
Bachmann, Herwig
Microbial competition reduces metabolic interaction distances to the low µm-range
title Microbial competition reduces metabolic interaction distances to the low µm-range
title_full Microbial competition reduces metabolic interaction distances to the low µm-range
title_fullStr Microbial competition reduces metabolic interaction distances to the low µm-range
title_full_unstemmed Microbial competition reduces metabolic interaction distances to the low µm-range
title_short Microbial competition reduces metabolic interaction distances to the low µm-range
title_sort microbial competition reduces metabolic interaction distances to the low µm-range
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8027890/
https://www.ncbi.nlm.nih.gov/pubmed/33077887
http://dx.doi.org/10.1038/s41396-020-00806-9
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