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Inference in skew generalized t-link models for clustered binary outcome via a parameter-expanded EM algorithm
Binary Generalized Linear Mixed Model (GLMM) is the most common method used by researchers to analyze clustered binary data in biological and social sciences. The traditional approach to GLMMs causes substantial bias in estimates due to steady shape of logistic and normal distribution assumptions th...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8028747/ https://www.ncbi.nlm.nih.gov/pubmed/33822818 http://dx.doi.org/10.1371/journal.pone.0249604 |
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author | Tovissodé, Chénangnon Frédéric Diop, Aliou Glèlè Kakaï, Romain |
author_facet | Tovissodé, Chénangnon Frédéric Diop, Aliou Glèlè Kakaï, Romain |
author_sort | Tovissodé, Chénangnon Frédéric |
collection | PubMed |
description | Binary Generalized Linear Mixed Model (GLMM) is the most common method used by researchers to analyze clustered binary data in biological and social sciences. The traditional approach to GLMMs causes substantial bias in estimates due to steady shape of logistic and normal distribution assumptions thereby resulting into wrong and misleading decisions. This study brings forward an approach governed by skew generalized t distributions that belong to a class of potentially skewed and heavy tailed distributions. Interestingly, both the traditional logistic and probit mixed models, as well as other available methods can be utilized within the skew generalized t-link model (SGTLM) frame. We have taken advantage of the Expectation-Maximization algorithm accelerated via parameter-expansion for model fitting. We evaluated the performance of this approach to GLMMs through a simulation experiment by varying sample size and data distribution. Our findings indicated that the proposed methodology outperforms competing approaches in estimating population parameters and predicting random effects, when the traditional link and normality assumptions are violated. In addition, empirical standard errors and information criteria proved useful for detecting spurious skewness and avoiding complex models for probit data. An application with respiratory infection data points out to the superiority of the SGTLM which turns to be the most adequate model. In future, studies should focus on integrating the demonstrated flexibility in other generalized linear mixed models to enhance robust modeling. |
format | Online Article Text |
id | pubmed-8028747 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-80287472021-04-14 Inference in skew generalized t-link models for clustered binary outcome via a parameter-expanded EM algorithm Tovissodé, Chénangnon Frédéric Diop, Aliou Glèlè Kakaï, Romain PLoS One Research Article Binary Generalized Linear Mixed Model (GLMM) is the most common method used by researchers to analyze clustered binary data in biological and social sciences. The traditional approach to GLMMs causes substantial bias in estimates due to steady shape of logistic and normal distribution assumptions thereby resulting into wrong and misleading decisions. This study brings forward an approach governed by skew generalized t distributions that belong to a class of potentially skewed and heavy tailed distributions. Interestingly, both the traditional logistic and probit mixed models, as well as other available methods can be utilized within the skew generalized t-link model (SGTLM) frame. We have taken advantage of the Expectation-Maximization algorithm accelerated via parameter-expansion for model fitting. We evaluated the performance of this approach to GLMMs through a simulation experiment by varying sample size and data distribution. Our findings indicated that the proposed methodology outperforms competing approaches in estimating population parameters and predicting random effects, when the traditional link and normality assumptions are violated. In addition, empirical standard errors and information criteria proved useful for detecting spurious skewness and avoiding complex models for probit data. An application with respiratory infection data points out to the superiority of the SGTLM which turns to be the most adequate model. In future, studies should focus on integrating the demonstrated flexibility in other generalized linear mixed models to enhance robust modeling. Public Library of Science 2021-04-06 /pmc/articles/PMC8028747/ /pubmed/33822818 http://dx.doi.org/10.1371/journal.pone.0249604 Text en © 2021 Tovissodé et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Tovissodé, Chénangnon Frédéric Diop, Aliou Glèlè Kakaï, Romain Inference in skew generalized t-link models for clustered binary outcome via a parameter-expanded EM algorithm |
title | Inference in skew generalized t-link models for clustered binary outcome via a parameter-expanded EM algorithm |
title_full | Inference in skew generalized t-link models for clustered binary outcome via a parameter-expanded EM algorithm |
title_fullStr | Inference in skew generalized t-link models for clustered binary outcome via a parameter-expanded EM algorithm |
title_full_unstemmed | Inference in skew generalized t-link models for clustered binary outcome via a parameter-expanded EM algorithm |
title_short | Inference in skew generalized t-link models for clustered binary outcome via a parameter-expanded EM algorithm |
title_sort | inference in skew generalized t-link models for clustered binary outcome via a parameter-expanded em algorithm |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8028747/ https://www.ncbi.nlm.nih.gov/pubmed/33822818 http://dx.doi.org/10.1371/journal.pone.0249604 |
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