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Identification of Potential Peptide Inhibitors of ACE-2 Target of SARS-CoV-2 from Buckwheat & Quinoa
It is well established fact that peptides from various foods offer human health benefits displaying diverse functionalities. Millets considered as super foods is a major alternative in recent days for traditional diet being rich in proteins and fibre along with trace minerals and vitamins. In this c...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Netherlands
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8030649/ https://www.ncbi.nlm.nih.gov/pubmed/33850482 http://dx.doi.org/10.1007/s10989-021-10211-1 |
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author | Rangaswamy, Ashok Nanjaiah Ashok, Arpitha Hanumanthappa, Pradeep Chandrashekaramurthy, Aparanji Sinduvalli Kumbaiah, Monika Hiregouda, Pratibha Sharma, Vaishali Sosalegowda, Aparna Huligerepura |
author_facet | Rangaswamy, Ashok Nanjaiah Ashok, Arpitha Hanumanthappa, Pradeep Chandrashekaramurthy, Aparanji Sinduvalli Kumbaiah, Monika Hiregouda, Pratibha Sharma, Vaishali Sosalegowda, Aparna Huligerepura |
author_sort | Rangaswamy, Ashok Nanjaiah |
collection | PubMed |
description | It is well established fact that peptides from various foods offer human health benefits displaying diverse functionalities. Millets considered as super foods is a major alternative in recent days for traditional diet being rich in proteins and fibre along with trace minerals and vitamins. In this connection, proteins from Buckwheat and Quinoa were digested by in vitro simulation digestion for the generation of peptides, analyzed by nLC-MS/MS and the functional annotations of the identified proteins/peptides were carried out. The study led to the identification of 34 small peptides and their parent proteins clustered into 4 gene functional groups and their localization prediction indicated their involvement in energy metabolism, transport and storage. Interestingly, the identified peptides maximally displayed DPP-IV and ACE inhibitions. The present study was extended to unravel ACE-2 inhibition targeting COVID-19 by selecting ACE-2-Spike binding domain for molecular docking studies. The NWRTVKYG interacted with the ACE-2-Spike interface displaying the feasible binding energy (− 213.63) and docking score (− 12.43) and the MD simulation revealed the ability of the peptide in stabilizing the protein-peptide composite. The present investigation thus establishes newer vista for food derived peptides having ACE-2 inhibitory potential as tentative strategy for SARS-CoV-2 therapeutics. |
format | Online Article Text |
id | pubmed-8030649 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer Netherlands |
record_format | MEDLINE/PubMed |
spelling | pubmed-80306492021-04-09 Identification of Potential Peptide Inhibitors of ACE-2 Target of SARS-CoV-2 from Buckwheat & Quinoa Rangaswamy, Ashok Nanjaiah Ashok, Arpitha Hanumanthappa, Pradeep Chandrashekaramurthy, Aparanji Sinduvalli Kumbaiah, Monika Hiregouda, Pratibha Sharma, Vaishali Sosalegowda, Aparna Huligerepura Int J Pept Res Ther Article It is well established fact that peptides from various foods offer human health benefits displaying diverse functionalities. Millets considered as super foods is a major alternative in recent days for traditional diet being rich in proteins and fibre along with trace minerals and vitamins. In this connection, proteins from Buckwheat and Quinoa were digested by in vitro simulation digestion for the generation of peptides, analyzed by nLC-MS/MS and the functional annotations of the identified proteins/peptides were carried out. The study led to the identification of 34 small peptides and their parent proteins clustered into 4 gene functional groups and their localization prediction indicated their involvement in energy metabolism, transport and storage. Interestingly, the identified peptides maximally displayed DPP-IV and ACE inhibitions. The present study was extended to unravel ACE-2 inhibition targeting COVID-19 by selecting ACE-2-Spike binding domain for molecular docking studies. The NWRTVKYG interacted with the ACE-2-Spike interface displaying the feasible binding energy (− 213.63) and docking score (− 12.43) and the MD simulation revealed the ability of the peptide in stabilizing the protein-peptide composite. The present investigation thus establishes newer vista for food derived peptides having ACE-2 inhibitory potential as tentative strategy for SARS-CoV-2 therapeutics. Springer Netherlands 2021-04-08 2021 /pmc/articles/PMC8030649/ /pubmed/33850482 http://dx.doi.org/10.1007/s10989-021-10211-1 Text en © The Author(s), under exclusive licence to Springer Nature B.V. 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Article Rangaswamy, Ashok Nanjaiah Ashok, Arpitha Hanumanthappa, Pradeep Chandrashekaramurthy, Aparanji Sinduvalli Kumbaiah, Monika Hiregouda, Pratibha Sharma, Vaishali Sosalegowda, Aparna Huligerepura Identification of Potential Peptide Inhibitors of ACE-2 Target of SARS-CoV-2 from Buckwheat & Quinoa |
title | Identification of Potential Peptide Inhibitors of ACE-2 Target of SARS-CoV-2 from Buckwheat & Quinoa |
title_full | Identification of Potential Peptide Inhibitors of ACE-2 Target of SARS-CoV-2 from Buckwheat & Quinoa |
title_fullStr | Identification of Potential Peptide Inhibitors of ACE-2 Target of SARS-CoV-2 from Buckwheat & Quinoa |
title_full_unstemmed | Identification of Potential Peptide Inhibitors of ACE-2 Target of SARS-CoV-2 from Buckwheat & Quinoa |
title_short | Identification of Potential Peptide Inhibitors of ACE-2 Target of SARS-CoV-2 from Buckwheat & Quinoa |
title_sort | identification of potential peptide inhibitors of ace-2 target of sars-cov-2 from buckwheat & quinoa |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8030649/ https://www.ncbi.nlm.nih.gov/pubmed/33850482 http://dx.doi.org/10.1007/s10989-021-10211-1 |
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