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Forecasting COVID-19 cases based on a parameter-varying stochastic SIR model
We address the prediction of the number of new cases and deaths for the coronavirus disease 2019 (COVID-19) over a future horizon from historical data (forecasting). We use a model-based approach based on a stochastic Susceptible–Infections–Removed (SIR) model with time-varying parameters, which cap...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Published by Elsevier Ltd.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8030732/ https://www.ncbi.nlm.nih.gov/pubmed/33850441 http://dx.doi.org/10.1016/j.arcontrol.2021.03.008 |
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author | Hespanha, João P. Chinchilla, Raphael Costa, Ramon R. Erdal, Murat K. Yang, Guosong |
author_facet | Hespanha, João P. Chinchilla, Raphael Costa, Ramon R. Erdal, Murat K. Yang, Guosong |
author_sort | Hespanha, João P. |
collection | PubMed |
description | We address the prediction of the number of new cases and deaths for the coronavirus disease 2019 (COVID-19) over a future horizon from historical data (forecasting). We use a model-based approach based on a stochastic Susceptible–Infections–Removed (SIR) model with time-varying parameters, which captures the evolution of the disease dynamics in response to changes in social behavior, non-pharmaceutical interventions, and testing rates. We show that, in the presence of asymptomatic cases, such model includes internal parameters and states that cannot be uniquely identified solely on the basis of measurements of new cases and deaths, but this does not preclude the construction of reliable forecasts for future values of these measurements. Such forecasts and associated confidence intervals can be computed using an iterative algorithm based on nonlinear optimization solvers, without the need for Monte Carlo sampling. Our results have been validated on an extensive COVID-19 dataset covering the period from March through December 2020 on 144 regions around the globe. |
format | Online Article Text |
id | pubmed-8030732 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Published by Elsevier Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-80307322021-04-09 Forecasting COVID-19 cases based on a parameter-varying stochastic SIR model Hespanha, João P. Chinchilla, Raphael Costa, Ramon R. Erdal, Murat K. Yang, Guosong Annu Rev Control Article We address the prediction of the number of new cases and deaths for the coronavirus disease 2019 (COVID-19) over a future horizon from historical data (forecasting). We use a model-based approach based on a stochastic Susceptible–Infections–Removed (SIR) model with time-varying parameters, which captures the evolution of the disease dynamics in response to changes in social behavior, non-pharmaceutical interventions, and testing rates. We show that, in the presence of asymptomatic cases, such model includes internal parameters and states that cannot be uniquely identified solely on the basis of measurements of new cases and deaths, but this does not preclude the construction of reliable forecasts for future values of these measurements. Such forecasts and associated confidence intervals can be computed using an iterative algorithm based on nonlinear optimization solvers, without the need for Monte Carlo sampling. Our results have been validated on an extensive COVID-19 dataset covering the period from March through December 2020 on 144 regions around the globe. Published by Elsevier Ltd. 2021 2021-04-08 /pmc/articles/PMC8030732/ /pubmed/33850441 http://dx.doi.org/10.1016/j.arcontrol.2021.03.008 Text en © 2021 Published by Elsevier Ltd. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article Hespanha, João P. Chinchilla, Raphael Costa, Ramon R. Erdal, Murat K. Yang, Guosong Forecasting COVID-19 cases based on a parameter-varying stochastic SIR model |
title | Forecasting COVID-19 cases based on a parameter-varying stochastic SIR model |
title_full | Forecasting COVID-19 cases based on a parameter-varying stochastic SIR model |
title_fullStr | Forecasting COVID-19 cases based on a parameter-varying stochastic SIR model |
title_full_unstemmed | Forecasting COVID-19 cases based on a parameter-varying stochastic SIR model |
title_short | Forecasting COVID-19 cases based on a parameter-varying stochastic SIR model |
title_sort | forecasting covid-19 cases based on a parameter-varying stochastic sir model |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8030732/ https://www.ncbi.nlm.nih.gov/pubmed/33850441 http://dx.doi.org/10.1016/j.arcontrol.2021.03.008 |
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